Protein–RNA interactions for Protein: A6NIV6

LRRIQ4, Leucine-rich repeat and IQ domain-containing protein 4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRIQ4A6NIV6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
LRRIQ4A6NIV6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
LRRIQ4A6NIV6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
LRRIQ4A6NIV6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.38■■□□□ 1.65
LRRIQ4A6NIV6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
LRRIQ4A6NIV6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC25.38■■□□□ 1.65
LRRIQ4A6NIV6 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.38■■□□□ 1.65
LRRIQ4A6NIV6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
LRRIQ4A6NIV6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.37■■□□□ 1.65
LRRIQ4A6NIV6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
LRRIQ4A6NIV6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
LRRIQ4A6NIV6 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
LRRIQ4A6NIV6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
LRRIQ4A6NIV6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
LRRIQ4A6NIV6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.36■■□□□ 1.65
LRRIQ4A6NIV6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
LRRIQ4A6NIV6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.36■■□□□ 1.65
LRRIQ4A6NIV6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
LRRIQ4A6NIV6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
LRRIQ4A6NIV6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
LRRIQ4A6NIV6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
LRRIQ4A6NIV6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
LRRIQ4A6NIV6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.35■■□□□ 1.65
LRRIQ4A6NIV6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.35■■□□□ 1.65
LRRIQ4A6NIV6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC25.35■■□□□ 1.65
LRRIQ4A6NIV6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LRRIQ4A6NIV6 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
LRRIQ4A6NIV6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
LRRIQ4A6NIV6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.34■■□□□ 1.65
LRRIQ4A6NIV6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
LRRIQ4A6NIV6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.34■■□□□ 1.65
LRRIQ4A6NIV6 AL117332.1-201ENST00000622628 974 ntBASIC25.34■■□□□ 1.65
LRRIQ4A6NIV6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.34■■□□□ 1.65
LRRIQ4A6NIV6 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.34■■□□□ 1.65
LRRIQ4A6NIV6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
LRRIQ4A6NIV6 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
LRRIQ4A6NIV6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.33■■□□□ 1.65
LRRIQ4A6NIV6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
LRRIQ4A6NIV6 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.33■■□□□ 1.65
LRRIQ4A6NIV6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.33■■□□□ 1.65
LRRIQ4A6NIV6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.33■■□□□ 1.65
LRRIQ4A6NIV6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
LRRIQ4A6NIV6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
LRRIQ4A6NIV6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
LRRIQ4A6NIV6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
LRRIQ4A6NIV6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
LRRIQ4A6NIV6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LRRIQ4A6NIV6 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LRRIQ4A6NIV6 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.32■■□□□ 1.64
LRRIQ4A6NIV6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.32■■□□□ 1.64
LRRIQ4A6NIV6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
LRRIQ4A6NIV6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LRRIQ4A6NIV6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.32■■□□□ 1.64
LRRIQ4A6NIV6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LRRIQ4A6NIV6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
LRRIQ4A6NIV6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.31■■□□□ 1.64
LRRIQ4A6NIV6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.31■■□□□ 1.64
LRRIQ4A6NIV6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.31■■□□□ 1.64
LRRIQ4A6NIV6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.31■■□□□ 1.64
LRRIQ4A6NIV6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
LRRIQ4A6NIV6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
LRRIQ4A6NIV6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.3■■□□□ 1.64
LRRIQ4A6NIV6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.3■■□□□ 1.64
LRRIQ4A6NIV6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LRRIQ4A6NIV6 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.3■■□□□ 1.64
LRRIQ4A6NIV6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.3■■□□□ 1.64
LRRIQ4A6NIV6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
LRRIQ4A6NIV6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.3■■□□□ 1.64
LRRIQ4A6NIV6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.29■■□□□ 1.64
LRRIQ4A6NIV6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LRRIQ4A6NIV6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
LRRIQ4A6NIV6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LRRIQ4A6NIV6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.29■■□□□ 1.64
LRRIQ4A6NIV6 MIR3621-201ENST00000580529 85 ntBASIC25.29■■□□□ 1.64
LRRIQ4A6NIV6 AL356740.2-201ENST00000601559 647 ntBASIC25.29■■□□□ 1.64
LRRIQ4A6NIV6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LRRIQ4A6NIV6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.28■■□□□ 1.64
LRRIQ4A6NIV6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
LRRIQ4A6NIV6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.28■■□□□ 1.64
LRRIQ4A6NIV6 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
LRRIQ4A6NIV6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.28■■□□□ 1.64
LRRIQ4A6NIV6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.28■■□□□ 1.64
LRRIQ4A6NIV6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.28■■□□□ 1.64
LRRIQ4A6NIV6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LRRIQ4A6NIV6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
LRRIQ4A6NIV6 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LRRIQ4A6NIV6 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.27■■□□□ 1.64
LRRIQ4A6NIV6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LRRIQ4A6NIV6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.27■■□□□ 1.64
LRRIQ4A6NIV6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.27■■□□□ 1.64
LRRIQ4A6NIV6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.27■■□□□ 1.64
LRRIQ4A6NIV6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.27■■□□□ 1.64
LRRIQ4A6NIV6 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.27■■□□□ 1.64
LRRIQ4A6NIV6 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.27■■□□□ 1.64
LRRIQ4A6NIV6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
LRRIQ4A6NIV6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
LRRIQ4A6NIV6 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
LRRIQ4A6NIV6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.26■■□□□ 1.63
LRRIQ4A6NIV6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.26■■□□□ 1.63
LRRIQ4A6NIV6 AL161729.1-201ENST00000604104 1402 ntBASIC25.26■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms