Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
LRIT2A6NDA9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.92■■□□□ 1.1
LRIT2A6NDA9 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRIT2A6NDA9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LRIT2A6NDA9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.92■■□□□ 1.1
LRIT2A6NDA9 Z92544.1-202ENST00000571933 1220 ntBASIC21.92■■□□□ 1.1
LRIT2A6NDA9 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
LRIT2A6NDA9 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRIT2A6NDA9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.91■■□□□ 1.1
LRIT2A6NDA9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.91■■□□□ 1.1
LRIT2A6NDA9 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
LRIT2A6NDA9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRIT2A6NDA9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.91■■□□□ 1.1
LRIT2A6NDA9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.91■■□□□ 1.1
LRIT2A6NDA9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.91■■□□□ 1.1
LRIT2A6NDA9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.91■■□□□ 1.1
LRIT2A6NDA9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
LRIT2A6NDA9 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRIT2A6NDA9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRIT2A6NDA9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.9■■□□□ 1.1
LRIT2A6NDA9 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRIT2A6NDA9 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
LRIT2A6NDA9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
LRIT2A6NDA9 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.9■■□□□ 1.1
LRIT2A6NDA9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRIT2A6NDA9 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
LRIT2A6NDA9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.89■■□□□ 1.09
LRIT2A6NDA9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.89■■□□□ 1.09
LRIT2A6NDA9 AC004448.1-201ENST00000458332 883 ntBASIC21.89■■□□□ 1.09
LRIT2A6NDA9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LRIT2A6NDA9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.89■■□□□ 1.09
LRIT2A6NDA9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.89■■□□□ 1.09
LRIT2A6NDA9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.89■■□□□ 1.09
LRIT2A6NDA9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.88■■□□□ 1.09
LRIT2A6NDA9 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LRIT2A6NDA9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
LRIT2A6NDA9 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LRIT2A6NDA9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.88■■□□□ 1.09
LRIT2A6NDA9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRIT2A6NDA9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.87■■□□□ 1.09
LRIT2A6NDA9 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRIT2A6NDA9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRIT2A6NDA9 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRIT2A6NDA9 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRIT2A6NDA9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRIT2A6NDA9 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRIT2A6NDA9 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
LRIT2A6NDA9 ABCB10P4-201ENST00000566803 2184 ntBASIC21.87■■□□□ 1.09
LRIT2A6NDA9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRIT2A6NDA9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRIT2A6NDA9 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LRIT2A6NDA9 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
LRIT2A6NDA9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
LRIT2A6NDA9 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRIT2A6NDA9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
LRIT2A6NDA9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.86■■□□□ 1.09
LRIT2A6NDA9 AC239859.2-201ENST00000444165 318 ntBASIC21.86■■□□□ 1.09
LRIT2A6NDA9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.86■■□□□ 1.09
LRIT2A6NDA9 KRT125P-201ENST00000546827 989 ntBASIC21.86■■□□□ 1.09
LRIT2A6NDA9 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.86■■□□□ 1.09
LRIT2A6NDA9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRIT2A6NDA9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LRIT2A6NDA9 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRIT2A6NDA9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
LRIT2A6NDA9 SNX5-217ENST00000606557 1087 ntBASIC21.85■■□□□ 1.09
LRIT2A6NDA9 AL035685.1-201ENST00000636663 812 ntBASIC21.85■■□□□ 1.09
LRIT2A6NDA9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRIT2A6NDA9 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRIT2A6NDA9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRIT2A6NDA9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRIT2A6NDA9 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LRIT2A6NDA9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.84■■□□□ 1.09
LRIT2A6NDA9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.84■■□□□ 1.09
LRIT2A6NDA9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
LRIT2A6NDA9 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRIT2A6NDA9 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LRIT2A6NDA9 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
LRIT2A6NDA9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.83■■□□□ 1.09
LRIT2A6NDA9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LRIT2A6NDA9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRIT2A6NDA9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRIT2A6NDA9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LRIT2A6NDA9 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.83■■□□□ 1.09
LRIT2A6NDA9 MIR4787-201ENST00000607364 84 ntBASIC21.83■■□□□ 1.09
LRIT2A6NDA9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LRIT2A6NDA9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
LRIT2A6NDA9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.83■■□□□ 1.08
LRIT2A6NDA9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
LRIT2A6NDA9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.82■■□□□ 1.08
LRIT2A6NDA9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRIT2A6NDA9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRIT2A6NDA9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.82■■□□□ 1.08
LRIT2A6NDA9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.82■■□□□ 1.08
LRIT2A6NDA9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.82■■□□□ 1.08
LRIT2A6NDA9 AC092028.1-203ENST00000608262 953 ntBASIC21.82■■□□□ 1.08
LRIT2A6NDA9 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRIT2A6NDA9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.82■■□□□ 1.08
LRIT2A6NDA9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRIT2A6NDA9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LRIT2A6NDA9 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms