Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRCOL1A6NCL2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRCOL1A6NCL2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRCOL1A6NCL2 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRCOL1A6NCL2 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRCOL1A6NCL2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LRCOL1A6NCL2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRCOL1A6NCL2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC15.29■□□□□ 0.04
LRCOL1A6NCL2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC15.29■□□□□ 0.04
LRCOL1A6NCL2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC15.29■□□□□ 0.04
LRCOL1A6NCL2 AL117332.1-201ENST00000622628 974 ntBASIC15.29■□□□□ 0.04
LRCOL1A6NCL2 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRCOL1A6NCL2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC15.29■□□□□ 0.04
LRCOL1A6NCL2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRCOL1A6NCL2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC15.29■□□□□ 0.04
LRCOL1A6NCL2 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LRCOL1A6NCL2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRCOL1A6NCL2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRCOL1A6NCL2 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCOL1A6NCL2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCOL1A6NCL2 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCOL1A6NCL2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRCOL1A6NCL2 AC008406.3-201ENST00000620001 1374 ntBASIC15.28■□□□□ 0.04
LRCOL1A6NCL2 MIR3621-201ENST00000580529 85 ntBASIC15.28■□□□□ 0.04
LRCOL1A6NCL2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC15.28■□□□□ 0.04
LRCOL1A6NCL2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCOL1A6NCL2 MIR6722-201ENST00000617286 78 ntBASIC15.28■□□□□ 0.04
LRCOL1A6NCL2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC15.28■□□□□ 0.04
LRCOL1A6NCL2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCOL1A6NCL2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCOL1A6NCL2 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCOL1A6NCL2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
LRCOL1A6NCL2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRCOL1A6NCL2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LRCOL1A6NCL2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRCOL1A6NCL2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRCOL1A6NCL2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRCOL1A6NCL2 CD72-202ENST00000378430 585 ntTSL 3 BASIC15.27■□□□□ 0.04
LRCOL1A6NCL2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC15.27■□□□□ 0.04
LRCOL1A6NCL2 SRR-208ENST00000576848 588 ntTSL 4 BASIC15.27■□□□□ 0.04
LRCOL1A6NCL2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC15.27■□□□□ 0.04
LRCOL1A6NCL2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
LRCOL1A6NCL2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC15.27■□□□□ 0.03
LRCOL1A6NCL2 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRCOL1A6NCL2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LRCOL1A6NCL2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
LRCOL1A6NCL2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LRCOL1A6NCL2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCOL1A6NCL2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCOL1A6NCL2 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCOL1A6NCL2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC15.26■□□□□ 0.03
LRCOL1A6NCL2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCOL1A6NCL2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC15.26■□□□□ 0.03
LRCOL1A6NCL2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC15.26■□□□□ 0.03
LRCOL1A6NCL2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCOL1A6NCL2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCOL1A6NCL2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LRCOL1A6NCL2 AC004448.1-201ENST00000458332 883 ntBASIC15.26■□□□□ 0.03
LRCOL1A6NCL2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC15.26■□□□□ 0.03
LRCOL1A6NCL2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRCOL1A6NCL2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC15.26■□□□□ 0.03
LRCOL1A6NCL2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC15.26■□□□□ 0.03
LRCOL1A6NCL2 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCOL1A6NCL2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCOL1A6NCL2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC15.26■□□□□ 0.03
LRCOL1A6NCL2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC15.26■□□□□ 0.03
LRCOL1A6NCL2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC15.26■□□□□ 0.03
LRCOL1A6NCL2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC15.26■□□□□ 0.03
LRCOL1A6NCL2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCOL1A6NCL2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC15.25■□□□□ 0.03
LRCOL1A6NCL2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LRCOL1A6NCL2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCOL1A6NCL2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCOL1A6NCL2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC15.25■□□□□ 0.03
LRCOL1A6NCL2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC15.25■□□□□ 0.03
LRCOL1A6NCL2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC15.25■□□□□ 0.03
LRCOL1A6NCL2 AL356740.2-201ENST00000601559 647 ntBASIC15.25■□□□□ 0.03
LRCOL1A6NCL2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC15.25■□□□□ 0.03
LRCOL1A6NCL2 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCOL1A6NCL2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCOL1A6NCL2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC15.25■□□□□ 0.03
LRCOL1A6NCL2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC15.25■□□□□ 0.03
LRCOL1A6NCL2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC15.24■□□□□ 0.03
LRCOL1A6NCL2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC15.24■□□□□ 0.03
LRCOL1A6NCL2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
LRCOL1A6NCL2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC15.24■□□□□ 0.03
LRCOL1A6NCL2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRCOL1A6NCL2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRCOL1A6NCL2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC15.24■□□□□ 0.03
LRCOL1A6NCL2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC15.24■□□□□ 0.03
LRCOL1A6NCL2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC15.24■□□□□ 0.03
LRCOL1A6NCL2 AC131281.2-201ENST00000520478 145 ntBASIC15.24■□□□□ 0.03
LRCOL1A6NCL2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC15.24■□□□□ 0.03
LRCOL1A6NCL2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC15.24■□□□□ 0.03
LRCOL1A6NCL2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
LRCOL1A6NCL2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC15.24■□□□□ 0.03
LRCOL1A6NCL2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
LRCOL1A6NCL2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRCOL1A6NCL2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRCOL1A6NCL2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms