Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.24■□□□□ 0.35
TRBV6-1A0A0K0K1D8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV6-1A0A0K0K1D8 GUSBP5-202ENST00000510805 1989 ntBASIC17.24■□□□□ 0.35
TRBV6-1A0A0K0K1D8 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRBV6-1A0A0K0K1D8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.23■□□□□ 0.35
TRBV6-1A0A0K0K1D8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.23■□□□□ 0.35
TRBV6-1A0A0K0K1D8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV6-1A0A0K0K1D8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.23■□□□□ 0.35
TRBV6-1A0A0K0K1D8 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV6-1A0A0K0K1D8 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV6-1A0A0K0K1D8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV6-1A0A0K0K1D8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.23■□□□□ 0.35
TRBV6-1A0A0K0K1D8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.23■□□□□ 0.35
TRBV6-1A0A0K0K1D8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV6-1A0A0K0K1D8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV6-1A0A0K0K1D8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.23■□□□□ 0.35
TRBV6-1A0A0K0K1D8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRBV6-1A0A0K0K1D8 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV6-1A0A0K0K1D8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV6-1A0A0K0K1D8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TRBV6-1A0A0K0K1D8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV6-1A0A0K0K1D8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV6-1A0A0K0K1D8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV6-1A0A0K0K1D8 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV6-1A0A0K0K1D8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TRBV6-1A0A0K0K1D8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV6-1A0A0K0K1D8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV6-1A0A0K0K1D8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV6-1A0A0K0K1D8 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV6-1A0A0K0K1D8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV6-1A0A0K0K1D8 C1orf229-201ENST00000623686 2258 ntBASIC17.22■□□□□ 0.35
TRBV6-1A0A0K0K1D8 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV6-1A0A0K0K1D8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TRBV6-1A0A0K0K1D8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV6-1A0A0K0K1D8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.21■□□□□ 0.35
TRBV6-1A0A0K0K1D8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV6-1A0A0K0K1D8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV6-1A0A0K0K1D8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.21■□□□□ 0.35
TRBV6-1A0A0K0K1D8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
TRBV6-1A0A0K0K1D8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV6-1A0A0K0K1D8 ECEL1P2-201ENST00000461596 1295 ntBASIC17.21■□□□□ 0.35
TRBV6-1A0A0K0K1D8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.21■□□□□ 0.35
TRBV6-1A0A0K0K1D8 AC093536.1-201ENST00000569153 554 ntBASIC17.21■□□□□ 0.35
TRBV6-1A0A0K0K1D8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV6-1A0A0K0K1D8 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV6-1A0A0K0K1D8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV6-1A0A0K0K1D8 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRBV6-1A0A0K0K1D8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
TRBV6-1A0A0K0K1D8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV6-1A0A0K0K1D8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRBV6-1A0A0K0K1D8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV6-1A0A0K0K1D8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.2■□□□□ 0.34
TRBV6-1A0A0K0K1D8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV6-1A0A0K0K1D8 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV6-1A0A0K0K1D8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV6-1A0A0K0K1D8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV6-1A0A0K0K1D8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.2■□□□□ 0.34
TRBV6-1A0A0K0K1D8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.2■□□□□ 0.34
TRBV6-1A0A0K0K1D8 MIR3648-2-201ENST00000581792 180 ntBASIC17.2■□□□□ 0.34
TRBV6-1A0A0K0K1D8 MIR3648-1-201ENST00000615959 180 ntBASIC17.2■□□□□ 0.34
TRBV6-1A0A0K0K1D8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC17.2■□□□□ 0.34
TRBV6-1A0A0K0K1D8 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV6-1A0A0K0K1D8 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRBV6-1A0A0K0K1D8 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRBV6-1A0A0K0K1D8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV6-1A0A0K0K1D8 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC17.2■□□□□ 0.34
TRBV6-1A0A0K0K1D8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV6-1A0A0K0K1D8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV6-1A0A0K0K1D8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV6-1A0A0K0K1D8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV6-1A0A0K0K1D8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV6-1A0A0K0K1D8 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV6-1A0A0K0K1D8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV6-1A0A0K0K1D8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TRBV6-1A0A0K0K1D8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV6-1A0A0K0K1D8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.19■□□□□ 0.34
TRBV6-1A0A0K0K1D8 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV6-1A0A0K0K1D8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV6-1A0A0K0K1D8 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TRBV6-1A0A0K0K1D8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV6-1A0A0K0K1D8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV6-1A0A0K0K1D8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.19■□□□□ 0.34
TRBV6-1A0A0K0K1D8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TRBV6-1A0A0K0K1D8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV6-1A0A0K0K1D8 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV6-1A0A0K0K1D8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV6-1A0A0K0K1D8 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV6-1A0A0K0K1D8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV6-1A0A0K0K1D8 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV6-1A0A0K0K1D8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.18■□□□□ 0.34
TRBV6-1A0A0K0K1D8 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.18■□□□□ 0.34
TRBV6-1A0A0K0K1D8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV6-1A0A0K0K1D8 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.18■□□□□ 0.34
TRBV6-1A0A0K0K1D8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV6-1A0A0K0K1D8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV6-1A0A0K0K1D8 ESRRAP2-201ENST00000418437 1549 ntBASIC17.17■□□□□ 0.34
TRBV6-1A0A0K0K1D8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBV6-1A0A0K0K1D8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV6-1A0A0K0K1D8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV6-1A0A0K0K1D8 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms