Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV41A0A0B4J266 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAV41A0A0B4J266 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV41A0A0B4J266 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV41A0A0B4J266 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV41A0A0B4J266 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV41A0A0B4J266 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
TRAV41A0A0B4J266 AC004448.1-201ENST00000458332 883 ntBASIC18.09■□□□□ 0.49
TRAV41A0A0B4J266 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAV41A0A0B4J266 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV41A0A0B4J266 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV41A0A0B4J266 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV41A0A0B4J266 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRAV41A0A0B4J266 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV41A0A0B4J266 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
TRAV41A0A0B4J266 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV41A0A0B4J266 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.08■□□□□ 0.49
TRAV41A0A0B4J266 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV41A0A0B4J266 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV41A0A0B4J266 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
TRAV41A0A0B4J266 LINC00543-201ENST00000567234 1845 ntBASIC18.08■□□□□ 0.48
TRAV41A0A0B4J266 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV41A0A0B4J266 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV41A0A0B4J266 TSPY9P-201ENST00000440215 945 ntBASIC18.08■□□□□ 0.48
TRAV41A0A0B4J266 TSPY11P-201ENST00000442607 1045 ntBASIC18.08■□□□□ 0.48
TRAV41A0A0B4J266 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.08■□□□□ 0.48
TRAV41A0A0B4J266 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.08■□□□□ 0.48
TRAV41A0A0B4J266 SNX5-217ENST00000606557 1087 ntBASIC18.08■□□□□ 0.48
TRAV41A0A0B4J266 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.08■□□□□ 0.48
TRAV41A0A0B4J266 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
TRAV41A0A0B4J266 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV41A0A0B4J266 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.08■□□□□ 0.48
TRAV41A0A0B4J266 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV41A0A0B4J266 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV41A0A0B4J266 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV41A0A0B4J266 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV41A0A0B4J266 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV41A0A0B4J266 GUSBP5-201ENST00000418136 578 ntBASIC18.07■□□□□ 0.48
TRAV41A0A0B4J266 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAV41A0A0B4J266 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV41A0A0B4J266 MTDHP2-201ENST00000601468 714 ntBASIC18.07■□□□□ 0.48
TRAV41A0A0B4J266 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.07■□□□□ 0.48
TRAV41A0A0B4J266 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
TRAV41A0A0B4J266 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV41A0A0B4J266 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV41A0A0B4J266 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV41A0A0B4J266 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV41A0A0B4J266 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TRAV41A0A0B4J266 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV41A0A0B4J266 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.07■□□□□ 0.48
TRAV41A0A0B4J266 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV41A0A0B4J266 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV41A0A0B4J266 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV41A0A0B4J266 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV41A0A0B4J266 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV41A0A0B4J266 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV41A0A0B4J266 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV41A0A0B4J266 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV41A0A0B4J266 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV41A0A0B4J266 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV41A0A0B4J266 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TRAV41A0A0B4J266 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV41A0A0B4J266 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TRAV41A0A0B4J266 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV41A0A0B4J266 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV41A0A0B4J266 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV41A0A0B4J266 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAV41A0A0B4J266 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV41A0A0B4J266 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.04■□□□□ 0.48
TRAV41A0A0B4J266 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV41A0A0B4J266 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV41A0A0B4J266 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV41A0A0B4J266 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV41A0A0B4J266 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
TRAV41A0A0B4J266 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
TRAV41A0A0B4J266 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV41A0A0B4J266 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV41A0A0B4J266 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV41A0A0B4J266 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV41A0A0B4J266 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.04■□□□□ 0.48
TRAV41A0A0B4J266 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TRAV41A0A0B4J266 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.04■□□□□ 0.48
TRAV41A0A0B4J266 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV41A0A0B4J266 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV41A0A0B4J266 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV41A0A0B4J266 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV41A0A0B4J266 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV41A0A0B4J266 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV41A0A0B4J266 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV41A0A0B4J266 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV41A0A0B4J266 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TRAV41A0A0B4J266 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV41A0A0B4J266 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV41A0A0B4J266 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV41A0A0B4J266 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV41A0A0B4J266 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TRAV41A0A0B4J266 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.03■□□□□ 0.48
TRAV41A0A0B4J266 UNC93B8-201ENST00000511903 705 ntBASIC18.03■□□□□ 0.48
TRAV41A0A0B4J266 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TRAV41A0A0B4J266 AC010997.5-201ENST00000609182 354 ntBASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms