Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 AL356441.2-201ENST00000443009 864 ntBASIC20.93■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 MIR4787-201ENST00000607364 84 ntBASIC20.93■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.93■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.92■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 AL022069.1-201ENST00000568025 1636 ntBASIC20.92■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.92■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.91■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.91■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 AC131274.2-201ENST00000580697 1507 ntBASIC20.9■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 AC021242.3-201ENST00000607598 1377 ntBASIC20.9■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.9■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 AC131212.1-201ENST00000613771 668 ntBASIC20.9■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF12-TNFSF13A0A0A6YY99 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 AC093323.1-202ENST00000635031 2045 ntBASIC20.89■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.89■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.88■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.88■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.88■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.88■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.87■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.87■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.86■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.85■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.85■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.85■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.85■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 UNC93B8-201ENST00000511903 705 ntBASIC20.85■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.85■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.85■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.85■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.85■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.85■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.84■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 AC004448.1-201ENST00000458332 883 ntBASIC20.84■□□□□ 0.93
TNFSF12-TNFSF13A0A0A6YY99 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms