Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 AC244394.1-201ENST00000435000 1665 ntBASIC15.65■□□□□ 0.1
YIPF1Q9Y548 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 FAM58BP-201ENST00000439056 645 ntBASIC15.65■□□□□ 0.1
YIPF1Q9Y548 KLF2P1-201ENST00000447438 1042 ntBASIC15.65■□□□□ 0.1
YIPF1Q9Y548 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 UPF3AP2-201ENST00000457924 1132 ntBASIC15.65■□□□□ 0.1
YIPF1Q9Y548 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 MARK2P5-201ENST00000507649 634 ntBASIC15.65■□□□□ 0.1
YIPF1Q9Y548 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 RN7SL774P-201ENST00000577467 290 ntBASIC15.65■□□□□ 0.1
YIPF1Q9Y548 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF1Q9Y548 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.64■□□□□ 0.09
YIPF1Q9Y548 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 ALG3P1-201ENST00000508806 1114 ntBASIC15.64■□□□□ 0.09
YIPF1Q9Y548 AC245884.6-201ENST00000515672 1067 ntBASIC15.64■□□□□ 0.09
YIPF1Q9Y548 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 CU633904.3-201ENST00000624042 1029 ntBASIC15.64■□□□□ 0.09
YIPF1Q9Y548 AC100757.4-201ENST00000626934 759 ntBASIC15.64■□□□□ 0.09
YIPF1Q9Y548 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 AL162727.3-201ENST00000635661 2787 ntBASIC15.64■□□□□ 0.09
YIPF1Q9Y548 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
YIPF1Q9Y548 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.63■□□□□ 0.09
YIPF1Q9Y548 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
YIPF1Q9Y548 AC008132.1-202ENST00000342005 1389 ntBASIC15.63■□□□□ 0.09
YIPF1Q9Y548 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.63■□□□□ 0.09
YIPF1Q9Y548 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
YIPF1Q9Y548 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
YIPF1Q9Y548 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
YIPF1Q9Y548 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
YIPF1Q9Y548 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.63■□□□□ 0.09
YIPF1Q9Y548 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
YIPF1Q9Y548 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms