Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 AC140878.1-201ENST00000565277 250 ntBASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 AC105021.1-202ENST00000570572 669 ntBASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 AC027796.2-201ENST00000575326 344 ntBASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.38
R3HCC1Q9Y3T6 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC17.46■□□□□ 0.38
R3HCC1Q9Y3T6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 AC105206.1-202ENST00000314927 2368 ntBASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 LSS-211ENST00000522411 2523 ntTSL 2 BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 MIR943-201ENST00000401286 94 ntBASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 RFPL4AP1-201ENST00000530883 850 ntBASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 AC093512.1-201ENST00000617969 520 ntBASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 AC023024.2-201ENST00000623561 1993 ntBASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 ABR-205ENST00000544583 5595 ntTSL 2 BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC17.45■□□□□ 0.38
R3HCC1Q9Y3T6 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 HAUS4P1-201ENST00000406739 1145 ntBASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.44■□□□□ 0.38
R3HCC1Q9Y3T6 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms