Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 DRD5P1-201ENST00000456605 1438 ntBASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 AC007787.1-201ENST00000588095 1583 ntBASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 INTS4P1-203ENST00000641008 3683 ntBASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.8□□□□□ -0.04
RNF11Q9Y3C5 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 SPDYE19P-201ENST00000338590 713 ntBASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 GNAQP1-201ENST00000444815 1067 ntBASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 AC092183.1-201ENST00000469884 875 ntBASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 RFPL4AP1-201ENST00000530883 850 ntBASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 TPRX2P-201ENST00000535362 881 ntBASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 AC036164.1-201ENST00000570544 333 ntBASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF11Q9Y3C5 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 CICP17-201ENST00000418553 2377 ntBASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 RN7SL399P-201ENST00000471648 279 ntBASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF11Q9Y3C5 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms