Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PNMA3Q9UL41 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PNMA3Q9UL41 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PNMA3Q9UL41 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PNMA3Q9UL41 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 AC011840.2-201ENST00000563063 1520 ntBASIC17.32■□□□□ 0.36
PNMA3Q9UL41 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 AL603832.2-201ENST00000566195 2125 ntBASIC17.32■□□□□ 0.36
PNMA3Q9UL41 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 CEP164P1-201ENST00000455142 418 ntBASIC17.32■□□□□ 0.36
PNMA3Q9UL41 AC116345.2-201ENST00000512837 523 ntBASIC17.32■□□□□ 0.36
PNMA3Q9UL41 AC009779.1-201ENST00000551138 283 ntBASIC17.32■□□□□ 0.36
PNMA3Q9UL41 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 AC008805.1-201ENST00000590892 364 ntBASIC17.32■□□□□ 0.36
PNMA3Q9UL41 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PNMA3Q9UL41 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 AC023824.1-201ENST00000562945 2975 ntBASIC17.31■□□□□ 0.36
PNMA3Q9UL41 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 HLA-J-204ENST00000495278 958 ntBASIC17.31■□□□□ 0.36
PNMA3Q9UL41 IGLV3-15-201ENST00000518356 244 ntBASIC17.31■□□□□ 0.36
PNMA3Q9UL41 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 IQSEC3P1-201ENST00000538799 536 ntBASIC17.31■□□□□ 0.36
PNMA3Q9UL41 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 AC242376.1-201ENST00000559033 726 ntBASIC17.31■□□□□ 0.36
PNMA3Q9UL41 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 AL137783.1-201ENST00000623494 1896 ntBASIC17.31■□□□□ 0.36
PNMA3Q9UL41 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PNMA3Q9UL41 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PNMA3Q9UL41 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PNMA3Q9UL41 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PNMA3Q9UL41 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PNMA3Q9UL41 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PNMA3Q9UL41 AC009093.2-202ENST00000620513 2079 ntBASIC17.3■□□□□ 0.36
PNMA3Q9UL41 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PNMA3Q9UL41 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms