Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 CYP4F24P-201ENST00000586049 1580 ntBASIC13.42□□□□□ -0.26
DUX4Q9UBX2 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 AC245100.5-201ENST00000452108 331 ntBASIC13.42□□□□□ -0.26
DUX4Q9UBX2 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 AC018892.3-201ENST00000623986 2499 ntBASIC13.42□□□□□ -0.26
DUX4Q9UBX2 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 AC148477.4-201ENST00000613430 1793 ntBASIC13.42□□□□□ -0.26
DUX4Q9UBX2 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 FO538757.1-201ENST00000623083 1397 ntBASIC13.42□□□□□ -0.26
DUX4Q9UBX2 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 AL359881.3-201ENST00000602640 1721 ntBASIC13.42□□□□□ -0.26
DUX4Q9UBX2 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
DUX4Q9UBX2 BNIP3P1-202ENST00000550043 1585 ntBASIC13.41□□□□□ -0.26
DUX4Q9UBX2 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 AC107890.1-201ENST00000422478 521 ntBASIC13.41□□□□□ -0.26
DUX4Q9UBX2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 AC015911.4-201ENST00000588022 1070 ntBASIC13.41□□□□□ -0.26
DUX4Q9UBX2 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms