Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC13□□□□□ -0.33
COMMD9Q9P000 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD9Q9P000 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
COMMD9Q9P000 COL6A4P2-202ENST00000504443 2753 ntBASIC12.99□□□□□ -0.33
COMMD9Q9P000 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.99□□□□□ -0.33
COMMD9Q9P000 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.99□□□□□ -0.33
COMMD9Q9P000 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
COMMD9Q9P000 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
COMMD9Q9P000 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
COMMD9Q9P000 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
COMMD9Q9P000 AC089987.1-201ENST00000551654 2209 ntBASIC12.99□□□□□ -0.33
COMMD9Q9P000 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
COMMD9Q9P000 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
COMMD9Q9P000 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
COMMD9Q9P000 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
COMMD9Q9P000 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
COMMD9Q9P000 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC12.99□□□□□ -0.33
COMMD9Q9P000 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.99□□□□□ -0.33
COMMD9Q9P000 AC112191.1-201ENST00000523689 701 ntBASIC12.99□□□□□ -0.33
COMMD9Q9P000 AC105233.2-201ENST00000523697 349 ntBASIC12.99□□□□□ -0.33
COMMD9Q9P000 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.99□□□□□ -0.33
COMMD9Q9P000 AF228730.5-201ENST00000530288 346 ntBASIC12.99□□□□□ -0.33
COMMD9Q9P000 MAL2-202ENST00000531508 892 ntTSL 3 BASIC12.99□□□□□ -0.33
COMMD9Q9P000 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.99□□□□□ -0.33
COMMD9Q9P000 AC145285.3-201ENST00000564603 959 ntBASIC12.99□□□□□ -0.33
COMMD9Q9P000 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.99□□□□□ -0.33
COMMD9Q9P000 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
COMMD9Q9P000 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.99□□□□□ -0.33
COMMD9Q9P000 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.99□□□□□ -0.33
COMMD9Q9P000 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.99□□□□□ -0.33
COMMD9Q9P000 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.99□□□□□ -0.33
COMMD9Q9P000 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
COMMD9Q9P000 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
COMMD9Q9P000 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
COMMD9Q9P000 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
COMMD9Q9P000 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
COMMD9Q9P000 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.99□□□□□ -0.33
COMMD9Q9P000 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.99□□□□□ -0.33
COMMD9Q9P000 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
COMMD9Q9P000 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
COMMD9Q9P000 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
COMMD9Q9P000 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
COMMD9Q9P000 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.98□□□□□ -0.33
COMMD9Q9P000 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COMMD9Q9P000 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
COMMD9Q9P000 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
COMMD9Q9P000 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.98□□□□□ -0.33
COMMD9Q9P000 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.98□□□□□ -0.33
COMMD9Q9P000 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
COMMD9Q9P000 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
COMMD9Q9P000 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COMMD9Q9P000 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COMMD9Q9P000 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
COMMD9Q9P000 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
COMMD9Q9P000 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
COMMD9Q9P000 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
COMMD9Q9P000 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.98□□□□□ -0.33
COMMD9Q9P000 DGCR9-201ENST00000609630 2415 ntBASIC12.98□□□□□ -0.33
COMMD9Q9P000 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
COMMD9Q9P000 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
COMMD9Q9P000 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.98□□□□□ -0.33
COMMD9Q9P000 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.98□□□□□ -0.33
COMMD9Q9P000 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.98□□□□□ -0.33
COMMD9Q9P000 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COMMD9Q9P000 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
COMMD9Q9P000 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
COMMD9Q9P000 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COMMD9Q9P000 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COMMD9Q9P000 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
COMMD9Q9P000 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.98□□□□□ -0.33
COMMD9Q9P000 MRPL3P1-201ENST00000400109 1033 ntBASIC12.98□□□□□ -0.33
COMMD9Q9P000 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.98□□□□□ -0.33
COMMD9Q9P000 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
COMMD9Q9P000 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.98□□□□□ -0.33
COMMD9Q9P000 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.98□□□□□ -0.33
COMMD9Q9P000 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
COMMD9Q9P000 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.98□□□□□ -0.33
COMMD9Q9P000 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.98□□□□□ -0.33
COMMD9Q9P000 RARRES2P8-201ENST00000566335 367 ntBASIC12.98□□□□□ -0.33
COMMD9Q9P000 MIR4313-201ENST00000580760 101 ntBASIC12.98□□□□□ -0.33
COMMD9Q9P000 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.98□□□□□ -0.33
COMMD9Q9P000 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.98□□□□□ -0.33
COMMD9Q9P000 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.98□□□□□ -0.33
COMMD9Q9P000 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.98□□□□□ -0.33
COMMD9Q9P000 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COMMD9Q9P000 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COMMD9Q9P000 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
COMMD9Q9P000 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
COMMD9Q9P000 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
COMMD9Q9P000 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
COMMD9Q9P000 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COMMD9Q9P000 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.98□□□□□ -0.33
COMMD9Q9P000 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COMMD9Q9P000 MAPK10-262ENST00000641051 5738 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms