Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 FXNP2-201ENST00000411625 547 ntBASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 AC005962.1-201ENST00000584100 773 ntBASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 C18orf15-201ENST00000623680 2534 ntBASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.14■□□□□ 0.33
HOXC10Q9NYD6 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 AC068587.6-202ENST00000641839 5619 ntBASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 ISCA2P1-201ENST00000425548 448 ntBASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 CICP12-201ENST00000455801 843 ntBASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 RPS2P36-201ENST00000456516 831 ntBASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 POU5F1P2-201ENST00000521750 823 ntBASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 AC023024.2-201ENST00000623561 1993 ntBASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC10Q9NYD6 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 AC136759.1-202ENST00000530858 2194 ntBASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 GCOM2-201ENST00000509133 1104 ntBASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.12■□□□□ 0.33
HOXC10Q9NYD6 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms