Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 AC092127.1-201ENST00000567093 3455 ntBASIC15.67■□□□□ 0.1
HPS4Q9NQG7 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 SLC25A24P2-201ENST00000415059 510 ntBASIC15.67■□□□□ 0.1
HPS4Q9NQG7 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 POM121L10P-201ENST00000436994 1285 ntBASIC15.67■□□□□ 0.1
HPS4Q9NQG7 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 HIST2H2BC-201ENST00000498492 580 ntBASIC15.67■□□□□ 0.1
HPS4Q9NQG7 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 RHOQP1-201ENST00000555758 579 ntBASIC15.67■□□□□ 0.1
HPS4Q9NQG7 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 PPY2P-201ENST00000582808 702 ntBASIC15.67■□□□□ 0.1
HPS4Q9NQG7 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 AC073413.1-201ENST00000603927 732 ntBASIC15.67■□□□□ 0.1
HPS4Q9NQG7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.67■□□□□ 0.1
HPS4Q9NQG7 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.67■□□□□ 0.1
HPS4Q9NQG7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 AC079178.1-201ENST00000420915 656 ntBASIC15.66■□□□□ 0.1
HPS4Q9NQG7 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 AL391280.1-201ENST00000506969 1062 ntBASIC15.66■□□□□ 0.1
HPS4Q9NQG7 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 AC022616.1-201ENST00000518688 554 ntBASIC15.66■□□□□ 0.1
HPS4Q9NQG7 RN7SL713P-201ENST00000582127 302 ntBASIC15.66■□□□□ 0.1
HPS4Q9NQG7 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 AC020914.3-201ENST00000594712 304 ntBASIC15.66■□□□□ 0.1
HPS4Q9NQG7 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 OR10B1P-201ENST00000601666 907 ntBASIC15.66■□□□□ 0.1
HPS4Q9NQG7 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 AL451050.2-201ENST00000606967 682 ntBASIC15.66■□□□□ 0.1
HPS4Q9NQG7 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HPS4Q9NQG7 AC022532.1-201ENST00000624563 1728 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms