Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 AL353779.1-201ENST00000434793 351 ntBASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 DOC2GP-202ENST00000514950 1163 ntBASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 AKR1B10P2-201ENST00000577332 927 ntBASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 AL662799.1-202ENST00000614205 422 ntBASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 AL109936.8-201ENST00000641772 604 ntBASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 AP001282.1-201ENST00000531301 1499 ntBASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 AC007541.1-201ENST00000570282 1469 ntBASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TIMMDC1Q9NPL8 KRT8P37-201ENST00000451609 1420 ntBASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 AC118758.2-201ENST00000614242 2813 ntBASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 AC087499.6-201ENST00000411576 835 ntBASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 DFFBP1-201ENST00000433250 979 ntBASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 AC093004.1-201ENST00000508850 424 ntBASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 TIMM17BP1-201ENST00000545713 516 ntBASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 AL132655.2-201ENST00000596276 594 ntBASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 AC074044.1-201ENST00000609673 707 ntBASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TIMMDC1Q9NPL8 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.65□□□□□ -0.06
TIMMDC1Q9NPL8 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TIMMDC1Q9NPL8 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TIMMDC1Q9NPL8 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TIMMDC1Q9NPL8 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TIMMDC1Q9NPL8 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TIMMDC1Q9NPL8 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms