Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NXF3Q9H4D5 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 AC044849.1-201ENST00000519737 1188 ntBASIC16.22■□□□□ 0.19
NXF3Q9H4D5 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 AC244452.3-201ENST00000636814 210 ntBASIC16.22■□□□□ 0.19
NXF3Q9H4D5 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 ACE3P-201ENST00000423435 1973 ntBASIC16.22■□□□□ 0.19
NXF3Q9H4D5 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.22■□□□□ 0.19
NXF3Q9H4D5 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 E2F3P2-201ENST00000447755 1422 ntBASIC16.21■□□□□ 0.19
NXF3Q9H4D5 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 SALL4P5-201ENST00000419001 1760 ntBASIC16.21■□□□□ 0.19
NXF3Q9H4D5 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 NKAIN1P1-201ENST00000435754 582 ntBASIC16.21■□□□□ 0.19
NXF3Q9H4D5 SCARNA20.5-201ENST00000516991 142 ntBASIC16.21■□□□□ 0.19
NXF3Q9H4D5 ACTG1P17-201ENST00000558391 1119 ntBASIC16.21■□□□□ 0.19
NXF3Q9H4D5 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 SHC1P1-201ENST00000425230 1745 ntBASIC16.21■□□□□ 0.19
NXF3Q9H4D5 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NXF3Q9H4D5 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NXF3Q9H4D5 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NXF3Q9H4D5 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NXF3Q9H4D5 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
NXF3Q9H4D5 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.2■□□□□ 0.18
NXF3Q9H4D5 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms