Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.05□□□□□ -0.16
POLR2J3Q9H1A7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.05□□□□□ -0.16
POLR2J3Q9H1A7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
POLR2J3Q9H1A7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.05□□□□□ -0.16
POLR2J3Q9H1A7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
POLR2J3Q9H1A7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR2J3Q9H1A7 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR2J3Q9H1A7 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.05□□□□□ -0.16
POLR2J3Q9H1A7 AC138969.2-201ENST00000532739 9932 ntBASIC14.05□□□□□ -0.16
POLR2J3Q9H1A7 HSPA7-201ENST00000445535 1927 ntBASIC14.05□□□□□ -0.16
POLR2J3Q9H1A7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.05□□□□□ -0.16
POLR2J3Q9H1A7 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
POLR2J3Q9H1A7 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
POLR2J3Q9H1A7 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR2J3Q9H1A7 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR2J3Q9H1A7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.05□□□□□ -0.16
POLR2J3Q9H1A7 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR2J3Q9H1A7 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR2J3Q9H1A7 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
POLR2J3Q9H1A7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.05□□□□□ -0.16
POLR2J3Q9H1A7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
POLR2J3Q9H1A7 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.05□□□□□ -0.16
POLR2J3Q9H1A7 AC041040.2-201ENST00000622926 2899 ntBASIC14.05□□□□□ -0.16
POLR2J3Q9H1A7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 AL139400.1-201ENST00000366220 510 ntBASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 AL645937.2-201ENST00000396808 931 ntBASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 AC107890.1-201ENST00000422478 521 ntBASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 AC114501.2-201ENST00000439631 535 ntBASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 AC027369.6-201ENST00000525520 931 ntBASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
POLR2J3Q9H1A7 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
POLR2J3Q9H1A7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms