Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 AC041040.2-201ENST00000622926 2899 ntBASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 AC152010.1-201ENST00000415779 2006 ntBASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FOXP3Q9BZS1 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 RPL13P2-201ENST00000440687 659 ntBASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 SPDYE18-201ENST00000510091 1050 ntBASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 AC010336.2-201ENST00000564226 506 ntBASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 AC025048.3-201ENST00000590609 569 ntBASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 AC004790.1-201ENST00000612686 536 ntBASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 AC005702.4-201ENST00000618393 416 ntBASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FOXP3Q9BZS1 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
FOXP3Q9BZS1 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.64■□□□□ 0.09
FOXP3Q9BZS1 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXP3Q9BZS1 AP001267.2-201ENST00000532619 2086 ntBASIC15.64■□□□□ 0.09
FOXP3Q9BZS1 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FOXP3Q9BZS1 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
FOXP3Q9BZS1 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXP3Q9BZS1 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXP3Q9BZS1 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXP3Q9BZS1 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
FOXP3Q9BZS1 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXP3Q9BZS1 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.64■□□□□ 0.09
FOXP3Q9BZS1 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXP3Q9BZS1 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.64■□□□□ 0.09
FOXP3Q9BZS1 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FOXP3Q9BZS1 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
FOXP3Q9BZS1 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FOXP3Q9BZS1 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
FOXP3Q9BZS1 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.64■□□□□ 0.09
FOXP3Q9BZS1 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FOXP3Q9BZS1 DGCR5-201ENST00000399539 862 ntBASIC15.64■□□□□ 0.09
FOXP3Q9BZS1 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.64■□□□□ 0.09
FOXP3Q9BZS1 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms