Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 TMEM261P1-201ENST00000604899 340 ntBASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 LINC02084-201ENST00000606069 1096 ntBASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 RN7SKP230-201ENST00000365642 335 ntBASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 AC114812.1-204ENST00000449669 728 ntBASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 RPL13AP25-201ENST00000484130 612 ntBASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 AC022616.1-201ENST00000518688 554 ntBASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 AC027796.2-201ENST00000575326 344 ntBASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 AC010327.5-201ENST00000586923 3061 ntBASIC13.82□□□□□ -0.2
RSPO3Q9BXY4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 MST1P2-201ENST00000457982 2291 ntBASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 AC007541.1-201ENST00000570282 1469 ntBASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO3Q9BXY4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms