Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 LINC01115-203ENST00000606068 577 ntBASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 AF228730.6-201ENST00000641497 218 ntBASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 AC084121.3-201ENST00000641716 218 ntBASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 AL109936.8-201ENST00000641772 604 ntBASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 AC084364.1-201ENST00000551967 1556 ntBASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 AC023024.2-201ENST00000623561 1993 ntBASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHRDL1Q9BU40 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 MIR943-201ENST00000401286 94 ntBASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 HLA-DRB6-201ENST00000411500 1235 ntBASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 FAM8A3P-201ENST00000427218 844 ntBASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 DUX4L27-201ENST00000554796 1261 ntBASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 AL158211.3-201ENST00000607385 239 ntBASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 AJ011931.1-201ENST00000618749 2492 ntBASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CHRDL1Q9BU40 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms