Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 AC007191.1-201ENST00000623179 2995 ntBASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 TMEM14DP-201ENST00000422205 345 ntBASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 U91328.1-201ENST00000437528 223 ntBASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 HILS1-202ENST00000545329 423 ntBASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 AC120045.2-201ENST00000567334 178 ntBASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 AC092127.1-201ENST00000567093 3455 ntBASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.78□□□□□ -0.36
PCGF1Q9BSM1 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
PCGF1Q9BSM1 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
PCGF1Q9BSM1 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
PCGF1Q9BSM1 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.77□□□□□ -0.36
PCGF1Q9BSM1 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.77□□□□□ -0.36
PCGF1Q9BSM1 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.77□□□□□ -0.36
PCGF1Q9BSM1 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
PCGF1Q9BSM1 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
PCGF1Q9BSM1 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
PCGF1Q9BSM1 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PCGF1Q9BSM1 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
PCGF1Q9BSM1 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 RPL5P21-201ENST00000404620 815 ntBASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 IGHV3-71-201ENST00000523324 359 ntBASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 TDH-203ENST00000531764 1110 ntBASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 KRT17P8-201ENST00000540749 863 ntBASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 RAB43P1-201ENST00000561790 589 ntBASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 AC015910.1-201ENST00000579400 975 ntBASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 AC015936.2-201ENST00000593177 259 ntBASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 AL008721.1-201ENST00000609964 604 ntBASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
PCGF1Q9BSM1 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms