Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 AC015802.1-201ENST00000588104 1449 ntBASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 UPF3AP3-201ENST00000420996 769 ntBASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 DHDH-204ENST00000523250 634 ntTSL 5 BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 AC109322.1-201ENST00000524499 1264 ntBASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 AL512356.2-201ENST00000546955 174 ntBASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 AC152010.1-201ENST00000415779 2006 ntBASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HDHD3Q9BSH5 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 AC079781.5-202ENST00000641784 3743 ntBASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 CNN2P11-201ENST00000429351 262 ntBASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 DAD1-205ENST00000543337 501 ntTSL 3 BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 AC044860.1-202ENST00000559481 777 ntBASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 AL360270.3-201ENST00000609118 1348 ntBASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HDHD3Q9BSH5 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms