Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CPNE2Q96FN4 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 AC138969.3-201ENST00000546612 1459 ntBASIC13.25□□□□□ -0.29
CPNE2Q96FN4 AC138932.2-201ENST00000548268 1459 ntBASIC13.25□□□□□ -0.29
CPNE2Q96FN4 AC126755.4-201ENST00000549796 1459 ntBASIC13.25□□□□□ -0.29
CPNE2Q96FN4 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.25□□□□□ -0.29
CPNE2Q96FN4 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 HLA-V-204ENST00000476601 1289 ntBASIC13.25□□□□□ -0.29
CPNE2Q96FN4 RN7SL618P-201ENST00000477850 296 ntBASIC13.25□□□□□ -0.29
CPNE2Q96FN4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 AC093520.2-201ENST00000561830 333 ntBASIC13.25□□□□□ -0.29
CPNE2Q96FN4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 AC025048.3-201ENST00000590609 569 ntBASIC13.25□□□□□ -0.29
CPNE2Q96FN4 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 AC005702.4-201ENST00000618393 416 ntBASIC13.25□□□□□ -0.29
CPNE2Q96FN4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 LINC00628-201ENST00000628516 1289 ntBASIC13.25□□□□□ -0.29
CPNE2Q96FN4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.25□□□□□ -0.29
CPNE2Q96FN4 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 AC007787.1-201ENST00000588095 1583 ntBASIC13.24□□□□□ -0.29
CPNE2Q96FN4 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 AC211486.1-202ENST00000416371 468 ntBASIC13.24□□□□□ -0.29
CPNE2Q96FN4 AC254562.1-201ENST00000417586 456 ntBASIC13.24□□□□□ -0.29
CPNE2Q96FN4 BX842568.4-201ENST00000421222 227 ntBASIC13.24□□□□□ -0.29
CPNE2Q96FN4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.24□□□□□ -0.29
CPNE2Q96FN4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms