Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
ECHDC3Q96DC8 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ECHDC3Q96DC8 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.06■□□□□ 0
ECHDC3Q96DC8 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ECHDC3Q96DC8 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
ECHDC3Q96DC8 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.06■□□□□ 0
ECHDC3Q96DC8 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.06■□□□□ 0
ECHDC3Q96DC8 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
ECHDC3Q96DC8 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.06■□□□□ 0
ECHDC3Q96DC8 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.06■□□□□ 0
ECHDC3Q96DC8 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ECHDC3Q96DC8 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ECHDC3Q96DC8 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
ECHDC3Q96DC8 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.05■□□□□ 0
ECHDC3Q96DC8 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.05■□□□□ 0
ECHDC3Q96DC8 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ECHDC3Q96DC8 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.05■□□□□ 0
ECHDC3Q96DC8 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.05■□□□□ 0
ECHDC3Q96DC8 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.05■□□□□ 0
ECHDC3Q96DC8 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ECHDC3Q96DC8 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ECHDC3Q96DC8 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ 0
ECHDC3Q96DC8 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.05■□□□□ 0
ECHDC3Q96DC8 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ECHDC3Q96DC8 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.05■□□□□ 0
ECHDC3Q96DC8 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
ECHDC3Q96DC8 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ECHDC3Q96DC8 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ECHDC3Q96DC8 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.05■□□□□ -0
ECHDC3Q96DC8 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.05■□□□□ -0
ECHDC3Q96DC8 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.05■□□□□ -0
ECHDC3Q96DC8 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.05■□□□□ -0
ECHDC3Q96DC8 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.05■□□□□ -0
ECHDC3Q96DC8 HOMER2P2-201ENST00000451621 847 ntBASIC15.05■□□□□ -0
ECHDC3Q96DC8 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
ECHDC3Q96DC8 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.05■□□□□ -0
ECHDC3Q96DC8 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.05■□□□□ -0
ECHDC3Q96DC8 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.05■□□□□ -0
ECHDC3Q96DC8 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.05■□□□□ -0
ECHDC3Q96DC8 AP006547.1-201ENST00000563435 692 ntBASIC15.05■□□□□ -0
ECHDC3Q96DC8 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.05■□□□□ -0
ECHDC3Q96DC8 PPY2P-201ENST00000582808 702 ntBASIC15.05■□□□□ -0
ECHDC3Q96DC8 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.05■□□□□ -0
ECHDC3Q96DC8 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.05■□□□□ -0
ECHDC3Q96DC8 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.05■□□□□ -0
ECHDC3Q96DC8 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.05■□□□□ -0
ECHDC3Q96DC8 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
ECHDC3Q96DC8 LINC01101-201ENST00000622953 1884 ntBASIC15.05■□□□□ -0
ECHDC3Q96DC8 AC020910.5-201ENST00000623668 1865 ntBASIC15.05■□□□□ -0
ECHDC3Q96DC8 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.05■□□□□ -0
ECHDC3Q96DC8 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ECHDC3Q96DC8 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.05■□□□□ -0
ECHDC3Q96DC8 AC009093.2-202ENST00000620513 2079 ntBASIC15.05■□□□□ -0
ECHDC3Q96DC8 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.05■□□□□ -0
ECHDC3Q96DC8 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
ECHDC3Q96DC8 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.05■□□□□ -0
ECHDC3Q96DC8 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ECHDC3Q96DC8 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
ECHDC3Q96DC8 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ECHDC3Q96DC8 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
ECHDC3Q96DC8 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ECHDC3Q96DC8 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.04■□□□□ -0
ECHDC3Q96DC8 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ECHDC3Q96DC8 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
ECHDC3Q96DC8 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ECHDC3Q96DC8 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.04■□□□□ -0
ECHDC3Q96DC8 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ECHDC3Q96DC8 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ECHDC3Q96DC8 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ECHDC3Q96DC8 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.04■□□□□ -0
ECHDC3Q96DC8 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
ECHDC3Q96DC8 SALL4P5-201ENST00000419001 1760 ntBASIC15.04■□□□□ -0
ECHDC3Q96DC8 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.04■□□□□ -0
ECHDC3Q96DC8 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.04■□□□□ -0
ECHDC3Q96DC8 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ECHDC3Q96DC8 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ECHDC3Q96DC8 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.04■□□□□ -0
ECHDC3Q96DC8 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
ECHDC3Q96DC8 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ECHDC3Q96DC8 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ECHDC3Q96DC8 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ECHDC3Q96DC8 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.04■□□□□ -0
ECHDC3Q96DC8 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
ECHDC3Q96DC8 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.04■□□□□ -0
ECHDC3Q96DC8 AC007274.1-201ENST00000439805 662 ntBASIC15.04■□□□□ -0
ECHDC3Q96DC8 AL355994.2-201ENST00000447882 704 ntBASIC15.04■□□□□ -0
ECHDC3Q96DC8 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
ECHDC3Q96DC8 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.04■□□□□ -0
ECHDC3Q96DC8 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.04■□□□□ -0
ECHDC3Q96DC8 ALG3P1-201ENST00000508806 1114 ntBASIC15.04■□□□□ -0
ECHDC3Q96DC8 AC131206.1-201ENST00000538078 1211 ntBASIC15.04■□□□□ -0
ECHDC3Q96DC8 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.04■□□□□ -0
ECHDC3Q96DC8 AC009542.2-202ENST00000619004 1067 ntBASIC15.04■□□□□ -0
ECHDC3Q96DC8 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.04■□□□□ -0
ECHDC3Q96DC8 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
ECHDC3Q96DC8 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ECHDC3Q96DC8 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.04■□□□□ -0
ECHDC3Q96DC8 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ECHDC3Q96DC8 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.04■□□□□ -0
ECHDC3Q96DC8 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms