Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHKBP1Q8TBC3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 AC104457.1-201ENST00000401024 814 ntBASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 POM121L10P-201ENST00000436994 1285 ntBASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 AKR7A2P1-201ENST00000460134 915 ntBASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 ACTG1P17-201ENST00000558391 1119 ntBASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 FAM45BP-202ENST00000592932 1624 ntBASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHKBP1Q8TBC3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 AC055811.4-201ENST00000624039 1754 ntBASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 CICP4-201ENST00000447359 2812 ntBASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 SCARNA20.5-201ENST00000516991 142 ntBASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 AC106820.3-201ENST00000561653 397 ntBASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 AC004466.1-201ENST00000599515 1080 ntBASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 AC244157.2-201ENST00000616239 1006 ntBASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 AL603764.1-201ENST00000636452 321 ntBASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHKBP1Q8TBC3 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 KRT8P4-201ENST00000509735 1454 ntBASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 AC138028.6-201ENST00000616106 1482 ntBASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 REXO1L5P-201ENST00000622260 2098 ntBASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms