Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 API5-211ENST00000534695 560 ntTSL 5 BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 AL139094.1-201ENST00000405549 1188 ntBASIC14.18□□□□□ -0.14
NUP43Q8NFH3 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.18□□□□□ -0.14
NUP43Q8NFH3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 ELK1P1-201ENST00000485699 580 ntBASIC14.18□□□□□ -0.14
NUP43Q8NFH3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 MIR4745-201ENST00000577608 62 ntBASIC14.18□□□□□ -0.14
NUP43Q8NFH3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.18□□□□□ -0.14
NUP43Q8NFH3 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NUP43Q8NFH3 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms