Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCNYL1Q8N7R7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.02□□□□□ -0.01
CCNYL1Q8N7R7 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
CCNYL1Q8N7R7 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.02□□□□□ -0.01
CCNYL1Q8N7R7 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
CCNYL1Q8N7R7 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.02□□□□□ -0.01
CCNYL1Q8N7R7 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCNYL1Q8N7R7 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 CNN2P11-201ENST00000429351 262 ntBASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 AP000347.1-202ENST00000435868 847 ntBASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 HLA-V-204ENST00000476601 1289 ntBASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 TEX28P1-201ENST00000613479 1221 ntBASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 TEX28P2-201ENST00000617764 1221 ntBASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCNYL1Q8N7R7 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 AC010336.2-201ENST00000564226 506 ntBASIC15□□□□□ -0.01
CCNYL1Q8N7R7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 SAMD11P1-201ENST00000571429 661 ntBASIC15□□□□□ -0.01
CCNYL1Q8N7R7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 AL138828.2-201ENST00000615812 383 ntBASIC15□□□□□ -0.01
CCNYL1Q8N7R7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCNYL1Q8N7R7 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms