Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
C11orf42Q8N5U0 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 AC005252.3-201ENST00000623855 2258 ntBASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 AC120045.2-201ENST00000567334 178 ntBASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 AC027307.3-201ENST00000594262 1100 ntBASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 AC107373.2-201ENST00000607735 490 ntBASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 AC023908.3-201ENST00000564211 3047 ntBASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
C11orf42Q8N5U0 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf42Q8N5U0 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.67□□□□□ -0.38
C11orf42Q8N5U0 AC126365.1-201ENST00000578585 1514 ntBASIC12.67□□□□□ -0.38
C11orf42Q8N5U0 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.67□□□□□ -0.38
C11orf42Q8N5U0 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.67□□□□□ -0.38
C11orf42Q8N5U0 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf42Q8N5U0 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf42Q8N5U0 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf42Q8N5U0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf42Q8N5U0 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.67□□□□□ -0.38
C11orf42Q8N5U0 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf42Q8N5U0 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
C11orf42Q8N5U0 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.67□□□□□ -0.38
C11orf42Q8N5U0 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
C11orf42Q8N5U0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
C11orf42Q8N5U0 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms