Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 AC004899.1-201ENST00000424687 1714 ntBASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 MST1L-201ENST00000442552 2185 ntBASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 PUDPP3-201ENST00000445368 636 ntBASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 RNMTL1P1-201ENST00000454103 560 ntBASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 AC012618.1-201ENST00000461223 412 ntBASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 AC125604.1-201ENST00000496255 707 ntBASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 AC068587.8-201ENST00000641239 219 ntBASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 FKBP4P6-201ENST00000457486 1332 ntBASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SYNPOQ8N3V7 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 LDHBP1-201ENST00000455730 1119 ntBASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 AL157791.1-201ENST00000553667 1699 ntBASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 PRKXP1-201ENST00000561423 1122 ntBASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 PPT1-215ENST00000641471 2368 ntBASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SYNPOQ8N3V7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SYNPOQ8N3V7 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms