Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHPFQ8IZ52 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.06
CHPFQ8IZ52 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 AKR7A2P1-201ENST00000460134 915 ntBASIC15.39■□□□□ 0.05
CHPFQ8IZ52 AC091804.1-201ENST00000486888 567 ntBASIC15.39■□□□□ 0.05
CHPFQ8IZ52 SCARNA20.5-201ENST00000516991 142 ntBASIC15.39■□□□□ 0.05
CHPFQ8IZ52 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 ZACNP1-201ENST00000612259 710 ntBASIC15.39■□□□□ 0.05
CHPFQ8IZ52 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.39■□□□□ 0.05
CHPFQ8IZ52 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHPFQ8IZ52 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHPFQ8IZ52 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHPFQ8IZ52 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.38■□□□□ 0.05
CHPFQ8IZ52 CICP11-201ENST00000434745 2827 ntBASIC15.38■□□□□ 0.05
CHPFQ8IZ52 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHPFQ8IZ52 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.38■□□□□ 0.05
CHPFQ8IZ52 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CHPFQ8IZ52 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHPFQ8IZ52 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CHPFQ8IZ52 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHPFQ8IZ52 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.38■□□□□ 0.05
CHPFQ8IZ52 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.38■□□□□ 0.05
CHPFQ8IZ52 AL391280.1-201ENST00000506969 1062 ntBASIC15.38■□□□□ 0.05
CHPFQ8IZ52 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.38■□□□□ 0.05
CHPFQ8IZ52 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.38■□□□□ 0.05
CHPFQ8IZ52 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHPFQ8IZ52 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.38■□□□□ 0.05
CHPFQ8IZ52 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.38■□□□□ 0.05
CHPFQ8IZ52 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.38■□□□□ 0.05
CHPFQ8IZ52 AC073413.1-201ENST00000603927 732 ntBASIC15.38■□□□□ 0.05
CHPFQ8IZ52 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.38■□□□□ 0.05
CHPFQ8IZ52 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.38■□□□□ 0.05
CHPFQ8IZ52 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CHPFQ8IZ52 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CHPFQ8IZ52 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHPFQ8IZ52 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHPFQ8IZ52 AC138028.6-201ENST00000616106 1482 ntBASIC15.38■□□□□ 0.05
CHPFQ8IZ52 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
CHPFQ8IZ52 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.38■□□□□ 0.05
CHPFQ8IZ52 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.38■□□□□ 0.05
CHPFQ8IZ52 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.38■□□□□ 0.05
CHPFQ8IZ52 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.38■□□□□ 0.05
CHPFQ8IZ52 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms