Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.92□□□□□ -0.18
C9orf40Q8IXQ3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
C9orf40Q8IXQ3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
C9orf40Q8IXQ3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
C9orf40Q8IXQ3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
C9orf40Q8IXQ3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.92□□□□□ -0.18
C9orf40Q8IXQ3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 FKBP4P6-201ENST00000457486 1332 ntBASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 INE2-201ENST00000630399 1874 ntBASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 AC011840.2-201ENST00000563063 1520 ntBASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 RN7SKP230-201ENST00000365642 335 ntBASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 AC023310.1-201ENST00000554836 735 ntBASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 AC138696.2-201ENST00000607376 223 ntBASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 AC003102.2-201ENST00000589195 1469 ntBASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
C9orf40Q8IXQ3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C9orf40Q8IXQ3 AL138725.1-201ENST00000407347 1314 ntBASIC13.9□□□□□ -0.18
C9orf40Q8IXQ3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.9□□□□□ -0.18
C9orf40Q8IXQ3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
C9orf40Q8IXQ3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C9orf40Q8IXQ3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
C9orf40Q8IXQ3 NORAD-201ENST00000565493 5339 ntBASIC13.9□□□□□ -0.18
C9orf40Q8IXQ3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C9orf40Q8IXQ3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
C9orf40Q8IXQ3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C9orf40Q8IXQ3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
C9orf40Q8IXQ3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
C9orf40Q8IXQ3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C9orf40Q8IXQ3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
C9orf40Q8IXQ3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C9orf40Q8IXQ3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C9orf40Q8IXQ3 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
C9orf40Q8IXQ3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
C9orf40Q8IXQ3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
C9orf40Q8IXQ3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
C9orf40Q8IXQ3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.9□□□□□ -0.18
C9orf40Q8IXQ3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
C9orf40Q8IXQ3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
C9orf40Q8IXQ3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C9orf40Q8IXQ3 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C9orf40Q8IXQ3 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C9orf40Q8IXQ3 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C9orf40Q8IXQ3 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.9□□□□□ -0.18
C9orf40Q8IXQ3 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms