Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 AC027601.5-201ENST00000624065 2482 ntBASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC83Q8IWF9 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 AC018665.1-201ENST00000622927 1362 ntBASIC17.79■□□□□ 0.44
CCDC83Q8IWF9 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 BRI3BPP1-201ENST00000594224 787 ntBASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 MIR600HG-201ENST00000449175 5984 ntBASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC83Q8IWF9 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CCDC83Q8IWF9 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms