Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.31■□□□□ 0.2
HERC6Q8IVU3 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HERC6Q8IVU3 SNORD3B-2-202ENST00000571722 791 ntBASIC16.31■□□□□ 0.2
HERC6Q8IVU3 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HERC6Q8IVU3 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
HERC6Q8IVU3 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.31■□□□□ 0.2
HERC6Q8IVU3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HERC6Q8IVU3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HERC6Q8IVU3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HERC6Q8IVU3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HERC6Q8IVU3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HERC6Q8IVU3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HERC6Q8IVU3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HERC6Q8IVU3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.31■□□□□ 0.2
HERC6Q8IVU3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HERC6Q8IVU3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HERC6Q8IVU3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.31■□□□□ 0.2
HERC6Q8IVU3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HERC6Q8IVU3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HERC6Q8IVU3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HERC6Q8IVU3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HERC6Q8IVU3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HERC6Q8IVU3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HERC6Q8IVU3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 DUX4L47-201ENST00000566374 394 ntBASIC16.3■□□□□ 0.2
HERC6Q8IVU3 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 AL132994.2-201ENST00000603120 687 ntBASIC16.3■□□□□ 0.2
HERC6Q8IVU3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 FLJ16779-201ENST00000612722 7638 ntBASIC16.3■□□□□ 0.2
HERC6Q8IVU3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HERC6Q8IVU3 AL365203.3-201ENST00000609742 2057 ntBASIC16.3■□□□□ 0.2
HERC6Q8IVU3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.29■□□□□ 0.2
HERC6Q8IVU3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.29■□□□□ 0.2
HERC6Q8IVU3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERC6Q8IVU3 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERC6Q8IVU3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERC6Q8IVU3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HERC6Q8IVU3 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERC6Q8IVU3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERC6Q8IVU3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERC6Q8IVU3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERC6Q8IVU3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERC6Q8IVU3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERC6Q8IVU3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HERC6Q8IVU3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HERC6Q8IVU3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HERC6Q8IVU3 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
HERC6Q8IVU3 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HERC6Q8IVU3 RPSAP31-201ENST00000416648 895 ntBASIC16.29■□□□□ 0.2
HERC6Q8IVU3 HLA-K-203ENST00000430151 1046 ntBASIC16.29■□□□□ 0.2
HERC6Q8IVU3 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.29■□□□□ 0.2
HERC6Q8IVU3 CFL1-206ENST00000527344 962 ntTSL 2 BASIC16.29■□□□□ 0.2
HERC6Q8IVU3 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.29■□□□□ 0.2
HERC6Q8IVU3 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HERC6Q8IVU3 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.29■□□□□ 0.2
HERC6Q8IVU3 AC135983.4-201ENST00000564116 1262 ntBASIC16.29■□□□□ 0.2
HERC6Q8IVU3 MIR4754-201ENST00000582477 89 ntBASIC16.29■□□□□ 0.2
HERC6Q8IVU3 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HERC6Q8IVU3 AL805961.1-201ENST00000642026 753 ntBASIC16.29■□□□□ 0.2
HERC6Q8IVU3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HERC6Q8IVU3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.29■□□□□ 0.2
HERC6Q8IVU3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HERC6Q8IVU3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms