Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VRK2Q86Y07 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
VRK2Q86Y07 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
VRK2Q86Y07 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.02□□□□□ -0.17
VRK2Q86Y07 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
VRK2Q86Y07 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VRK2Q86Y07 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VRK2Q86Y07 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
VRK2Q86Y07 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.02□□□□□ -0.17
VRK2Q86Y07 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.02□□□□□ -0.17
VRK2Q86Y07 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.02□□□□□ -0.17
VRK2Q86Y07 UGT1A2P-201ENST00000454886 866 ntBASIC14.02□□□□□ -0.17
VRK2Q86Y07 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
VRK2Q86Y07 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.02□□□□□ -0.17
VRK2Q86Y07 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VRK2Q86Y07 BRI3BPP1-201ENST00000594224 787 ntBASIC14.02□□□□□ -0.17
VRK2Q86Y07 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.02□□□□□ -0.17
VRK2Q86Y07 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.02□□□□□ -0.17
VRK2Q86Y07 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.02□□□□□ -0.17
VRK2Q86Y07 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.02□□□□□ -0.17
VRK2Q86Y07 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.02□□□□□ -0.17
VRK2Q86Y07 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VRK2Q86Y07 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VRK2Q86Y07 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VRK2Q86Y07 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.02□□□□□ -0.17
VRK2Q86Y07 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
VRK2Q86Y07 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.02□□□□□ -0.17
VRK2Q86Y07 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VRK2Q86Y07 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.02□□□□□ -0.17
VRK2Q86Y07 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.02□□□□□ -0.17
VRK2Q86Y07 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.02□□□□□ -0.17
VRK2Q86Y07 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
VRK2Q86Y07 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VRK2Q86Y07 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.02□□□□□ -0.17
VRK2Q86Y07 BX640514.1-201ENST00000583223 1918 ntBASIC14.02□□□□□ -0.17
VRK2Q86Y07 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK2Q86Y07 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK2Q86Y07 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.01□□□□□ -0.17
VRK2Q86Y07 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.01□□□□□ -0.17
VRK2Q86Y07 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
VRK2Q86Y07 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK2Q86Y07 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK2Q86Y07 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK2Q86Y07 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK2Q86Y07 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
VRK2Q86Y07 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VRK2Q86Y07 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK2Q86Y07 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VRK2Q86Y07 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VRK2Q86Y07 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK2Q86Y07 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.01□□□□□ -0.17
VRK2Q86Y07 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK2Q86Y07 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.01□□□□□ -0.17
VRK2Q86Y07 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.01□□□□□ -0.17
VRK2Q86Y07 MEP1AP4-201ENST00000423244 1087 ntBASIC14.01□□□□□ -0.17
VRK2Q86Y07 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.01□□□□□ -0.17
VRK2Q86Y07 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.01□□□□□ -0.17
VRK2Q86Y07 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VRK2Q86Y07 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VRK2Q86Y07 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.01□□□□□ -0.17
VRK2Q86Y07 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.01□□□□□ -0.17
VRK2Q86Y07 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.01□□□□□ -0.17
VRK2Q86Y07 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.01□□□□□ -0.17
VRK2Q86Y07 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK2Q86Y07 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
VRK2Q86Y07 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK2Q86Y07 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.01□□□□□ -0.17
VRK2Q86Y07 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.01□□□□□ -0.17
VRK2Q86Y07 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK2Q86Y07 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK2Q86Y07 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK2Q86Y07 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK2Q86Y07 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
VRK2Q86Y07 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
VRK2Q86Y07 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK2Q86Y07 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK2Q86Y07 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.01□□□□□ -0.17
VRK2Q86Y07 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK2Q86Y07 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.01□□□□□ -0.17
VRK2Q86Y07 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK2Q86Y07 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VRK2Q86Y07 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK2Q86Y07 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK2Q86Y07 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VRK2Q86Y07 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14□□□□□ -0.17
VRK2Q86Y07 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
VRK2Q86Y07 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VRK2Q86Y07 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
VRK2Q86Y07 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14□□□□□ -0.17
VRK2Q86Y07 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
VRK2Q86Y07 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14□□□□□ -0.17
VRK2Q86Y07 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
VRK2Q86Y07 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14□□□□□ -0.17
VRK2Q86Y07 INTS4P2-202ENST00000614726 2019 ntBASIC14□□□□□ -0.17
VRK2Q86Y07 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
VRK2Q86Y07 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
VRK2Q86Y07 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VRK2Q86Y07 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14□□□□□ -0.17
VRK2Q86Y07 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14□□□□□ -0.17
VRK2Q86Y07 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms