Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 KRT17P5-201ENST00000332088 839 ntBASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 AC012441.2-201ENST00000444843 739 ntBASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 MT3-203ENST00000565838 421 ntTSL 3 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 AC027601.3-201ENST00000622907 509 ntBASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 HELLS-212ENST00000630929 400 ntTSL 5 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 STK26-204ENST00000481105 1835 ntTSL 2 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 AC020658.6-201ENST00000623564 1870 ntBASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 AP003398.1-201ENST00000531124 318 ntBASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 DBP-202ENST00000593500 712 ntTSL 2 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 TMBIM7P-202ENST00000641474 1516 ntBASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 AC007950.2-201ENST00000615045 2347 ntBASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 RN7SKP109-201ENST00000410592 316 ntBASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 CDC23-208ENST00000505120 455 ntTSL 3 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 LINC01783-202ENST00000614408 828 ntBASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 BX284668.2-205ENST00000619677 828 ntBASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 AC025183.3-201ENST00000623526 1482 ntBASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC9.06□□□□□ -0.96
VPS13BQ7Z7G8 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 MBP-202ENST00000355994 2772 ntTSL 5 BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 JTB-202ENST00000356648 1040 ntTSL 2 BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 AC012508.2-201ENST00000567613 1472 ntBASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC9.05□□□□□ -0.96
VPS13BQ7Z7G8 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC9.05□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms