Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 PIN4P1-201ENST00000451079 396 ntBASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 BUD31-205ENST00000456893 512 ntTSL 5 BASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 AL031713.1-201ENST00000564813 661 ntBASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 AC138894.2-201ENST00000602838 371 ntBASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
OTOP1Q7RTM1 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
OTOP1Q7RTM1 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
OTOP1Q7RTM1 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
OTOP1Q7RTM1 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.33■□□□□ 0.37
OTOP1Q7RTM1 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
OTOP1Q7RTM1 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
OTOP1Q7RTM1 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.33■□□□□ 0.37
OTOP1Q7RTM1 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
OTOP1Q7RTM1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
OTOP1Q7RTM1 AL158070.2-201ENST00000623713 1621 ntBASIC17.33■□□□□ 0.37
OTOP1Q7RTM1 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.33■□□□□ 0.37
OTOP1Q7RTM1 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 IDS-203ENST00000428056 1213 ntTSL 2 BASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 RCC2P8-201ENST00000502779 1035 ntBASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 RBM8B-201ENST00000555532 525 ntBASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 AC100827.2-201ENST00000563214 1194 ntBASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 AL132994.2-201ENST00000603120 687 ntBASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 AL136301.1-201ENST00000615830 422 ntBASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 AC007718.1-201ENST00000621078 280 ntBASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 PPT1-215ENST00000641471 2368 ntBASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.33■□□□□ 0.36
OTOP1Q7RTM1 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC17.32■□□□□ 0.36
OTOP1Q7RTM1 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms