Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAPH1Q70E73 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAPH1Q70E73 AC107918.4-201ENST00000641966 3141 ntBASIC15.29■□□□□ 0.04
RAPH1Q70E73 AC018529.2-202ENST00000611482 3087 ntBASIC15.29■□□□□ 0.04
RAPH1Q70E73 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAPH1Q70E73 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAPH1Q70E73 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAPH1Q70E73 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAPH1Q70E73 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAPH1Q70E73 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAPH1Q70E73 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAPH1Q70E73 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAPH1Q70E73 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAPH1Q70E73 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RAPH1Q70E73 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAPH1Q70E73 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.29■□□□□ 0.04
RAPH1Q70E73 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAPH1Q70E73 TOMM22P5-201ENST00000416399 439 ntBASIC15.29■□□□□ 0.04
RAPH1Q70E73 AC125807.1-201ENST00000483097 614 ntBASIC15.29■□□□□ 0.04
RAPH1Q70E73 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.29■□□□□ 0.04
RAPH1Q70E73 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.29■□□□□ 0.04
RAPH1Q70E73 AC109322.1-201ENST00000524499 1264 ntBASIC15.29■□□□□ 0.04
RAPH1Q70E73 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.29■□□□□ 0.04
RAPH1Q70E73 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.29■□□□□ 0.04
RAPH1Q70E73 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RAPH1Q70E73 AC010336.2-201ENST00000564226 506 ntBASIC15.29■□□□□ 0.04
RAPH1Q70E73 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
RAPH1Q70E73 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.29■□□□□ 0.04
RAPH1Q70E73 AL645728.2-202ENST00000641679 227 ntBASIC15.29■□□□□ 0.04
RAPH1Q70E73 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAPH1Q70E73 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.29■□□□□ 0.04
RAPH1Q70E73 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAPH1Q70E73 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.29■□□□□ 0.04
RAPH1Q70E73 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAPH1Q70E73 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAPH1Q70E73 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAPH1Q70E73 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAPH1Q70E73 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAPH1Q70E73 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAPH1Q70E73 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAPH1Q70E73 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAPH1Q70E73 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAPH1Q70E73 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
RAPH1Q70E73 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
RAPH1Q70E73 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAPH1Q70E73 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAPH1Q70E73 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAPH1Q70E73 AC138969.3-201ENST00000546612 1459 ntBASIC15.28■□□□□ 0.04
RAPH1Q70E73 AC138932.2-201ENST00000548268 1459 ntBASIC15.28■□□□□ 0.04
RAPH1Q70E73 AC126755.4-201ENST00000549796 1459 ntBASIC15.28■□□□□ 0.04
RAPH1Q70E73 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.28■□□□□ 0.04
RAPH1Q70E73 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAPH1Q70E73 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAPH1Q70E73 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.28■□□□□ 0.04
RAPH1Q70E73 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAPH1Q70E73 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RAPH1Q70E73 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAPH1Q70E73 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAPH1Q70E73 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAPH1Q70E73 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.28■□□□□ 0.04
RAPH1Q70E73 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAPH1Q70E73 TUBB3P1-201ENST00000405796 1332 ntBASIC15.28■□□□□ 0.04
RAPH1Q70E73 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAPH1Q70E73 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAPH1Q70E73 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.28■□□□□ 0.04
RAPH1Q70E73 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.28■□□□□ 0.04
RAPH1Q70E73 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RAPH1Q70E73 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
RAPH1Q70E73 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAPH1Q70E73 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.28■□□□□ 0.04
RAPH1Q70E73 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RAPH1Q70E73 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.28■□□□□ 0.04
RAPH1Q70E73 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.28■□□□□ 0.04
RAPH1Q70E73 AC004967.1-201ENST00000453589 447 ntBASIC15.28■□□□□ 0.04
RAPH1Q70E73 HLA-J-203ENST00000494367 1087 ntBASIC15.28■□□□□ 0.04
RAPH1Q70E73 SDHAP3-202ENST00000515467 728 ntBASIC15.28■□□□□ 0.04
RAPH1Q70E73 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.28■□□□□ 0.04
RAPH1Q70E73 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RAPH1Q70E73 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
RAPH1Q70E73 AC073592.8-201ENST00000624126 511 ntBASIC15.28■□□□□ 0.04
RAPH1Q70E73 Z92544.3-201ENST00000624747 417 ntBASIC15.28■□□□□ 0.04
RAPH1Q70E73 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
RAPH1Q70E73 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAPH1Q70E73 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAPH1Q70E73 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAPH1Q70E73 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAPH1Q70E73 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAPH1Q70E73 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.28■□□□□ 0.04
RAPH1Q70E73 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.28■□□□□ 0.04
RAPH1Q70E73 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RAPH1Q70E73 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.28■□□□□ 0.04
RAPH1Q70E73 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
RAPH1Q70E73 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RAPH1Q70E73 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.28■□□□□ 0.04
RAPH1Q70E73 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAPH1Q70E73 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.28■□□□□ 0.04
RAPH1Q70E73 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAPH1Q70E73 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RAPH1Q70E73 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAPH1Q70E73 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms