Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 TSSK5P-201ENST00000423978 907 ntBASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 LINC02560-201ENST00000596379 459 ntBASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 AC118758.2-201ENST00000614242 2813 ntBASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 STK40-201ENST00000359297 4837 ntTSL 2 BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 AL139385.1-201ENST00000611744 3272 ntBASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDZRN4Q6ZMN7 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDZRN4Q6ZMN7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDZRN4Q6ZMN7 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
PDZRN4Q6ZMN7 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.52■□□□□ 0.4
PDZRN4Q6ZMN7 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PDZRN4Q6ZMN7 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
PDZRN4Q6ZMN7 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PDZRN4Q6ZMN7 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDZRN4Q6ZMN7 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDZRN4Q6ZMN7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.52■□□□□ 0.4
PDZRN4Q6ZMN7 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDZRN4Q6ZMN7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDZRN4Q6ZMN7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDZRN4Q6ZMN7 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PDZRN4Q6ZMN7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.52■□□□□ 0.4
PDZRN4Q6ZMN7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.52■□□□□ 0.4
PDZRN4Q6ZMN7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.52■□□□□ 0.4
PDZRN4Q6ZMN7 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.52■□□□□ 0.4
PDZRN4Q6ZMN7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.52■□□□□ 0.4
PDZRN4Q6ZMN7 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDZRN4Q6ZMN7 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PDZRN4Q6ZMN7 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
PDZRN4Q6ZMN7 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PDZRN4Q6ZMN7 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.52■□□□□ 0.39
PDZRN4Q6ZMN7 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDZRN4Q6ZMN7 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PDZRN4Q6ZMN7 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC17.51■□□□□ 0.39
PDZRN4Q6ZMN7 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC17.51■□□□□ 0.39
PDZRN4Q6ZMN7 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PDZRN4Q6ZMN7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDZRN4Q6ZMN7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.51■□□□□ 0.39
PDZRN4Q6ZMN7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PDZRN4Q6ZMN7 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.51■□□□□ 0.39
PDZRN4Q6ZMN7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.51■□□□□ 0.39
PDZRN4Q6ZMN7 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDZRN4Q6ZMN7 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC17.51■□□□□ 0.39
PDZRN4Q6ZMN7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDZRN4Q6ZMN7 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDZRN4Q6ZMN7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.51■□□□□ 0.39
PDZRN4Q6ZMN7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDZRN4Q6ZMN7 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDZRN4Q6ZMN7 AC093724.1-201ENST00000448659 1027 ntBASIC17.51■□□□□ 0.39
PDZRN4Q6ZMN7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.51■□□□□ 0.39
PDZRN4Q6ZMN7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.51■□□□□ 0.39
PDZRN4Q6ZMN7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms