Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 PRYP5-201ENST00000451909 266 ntBASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 AC243562.2-201ENST00000561247 970 ntBASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 AL139288.1-201ENST00000623748 933 ntBASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 AC083964.2-201ENST00000623988 2396 ntBASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC11.8□□□□□ -0.52
KCNIP4Q6PIL6 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 AP002469.2-201ENST00000531724 424 ntBASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 MPI-205ENST00000562606 1052 ntTSL 3 BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 AL022326.1-202ENST00000641533 845 ntBASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
KCNIP4Q6PIL6 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms