Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 MIR3197-201ENST00000582241 73 ntBASIC13.32□□□□□ -0.28
C11orf88Q6PI97 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 ZBED1P1-201ENST00000502364 1930 ntBASIC13.32□□□□□ -0.28
C11orf88Q6PI97 BX640514.1-201ENST00000583223 1918 ntBASIC13.32□□□□□ -0.28
C11orf88Q6PI97 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.32□□□□□ -0.28
C11orf88Q6PI97 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 REXO1L1P-202ENST00000608646 1974 ntBASIC13.31□□□□□ -0.28
C11orf88Q6PI97 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 RNU1-129P-201ENST00000384064 167 ntBASIC13.31□□□□□ -0.28
C11orf88Q6PI97 MIR770-201ENST00000390219 98 ntBASIC13.31□□□□□ -0.28
C11orf88Q6PI97 ADH5P3-201ENST00000433842 1137 ntBASIC13.31□□□□□ -0.28
C11orf88Q6PI97 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 FAM86GP-201ENST00000448322 971 ntBASIC13.31□□□□□ -0.28
C11orf88Q6PI97 TIMM8BP1-201ENST00000452384 211 ntBASIC13.31□□□□□ -0.28
C11orf88Q6PI97 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 AC109635.5-201ENST00000533593 962 ntBASIC13.31□□□□□ -0.28
C11orf88Q6PI97 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 RARRES2P8-201ENST00000566335 367 ntBASIC13.31□□□□□ -0.28
C11orf88Q6PI97 U1.21-201ENST00000580816 167 ntBASIC13.31□□□□□ -0.28
C11orf88Q6PI97 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 AL009183.1-201ENST00000603760 355 ntBASIC13.31□□□□□ -0.28
C11orf88Q6PI97 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 AC009093.7-201ENST00000623853 1223 ntBASIC13.31□□□□□ -0.28
C11orf88Q6PI97 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms