Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTR9Q6PD62 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTR9Q6PD62 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CTR9Q6PD62 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.94■□□□□ 0.46
CTR9Q6PD62 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CTR9Q6PD62 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTR9Q6PD62 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTR9Q6PD62 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CTR9Q6PD62 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTR9Q6PD62 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTR9Q6PD62 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.94■□□□□ 0.46
CTR9Q6PD62 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTR9Q6PD62 FAM86MP-201ENST00000340703 885 ntBASIC17.94■□□□□ 0.46
CTR9Q6PD62 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.94■□□□□ 0.46
CTR9Q6PD62 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.94■□□□□ 0.46
CTR9Q6PD62 ACTBP11-201ENST00000436287 1126 ntBASIC17.94■□□□□ 0.46
CTR9Q6PD62 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTR9Q6PD62 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CTR9Q6PD62 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTR9Q6PD62 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.94■□□□□ 0.46
CTR9Q6PD62 RN7SL560P-201ENST00000577943 264 ntBASIC17.94■□□□□ 0.46
CTR9Q6PD62 MIR4741-201ENST00000579822 90 ntBASIC17.94■□□□□ 0.46
CTR9Q6PD62 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.94■□□□□ 0.46
CTR9Q6PD62 OR10B1P-201ENST00000601666 907 ntBASIC17.94■□□□□ 0.46
CTR9Q6PD62 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.94■□□□□ 0.46
CTR9Q6PD62 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.94■□□□□ 0.46
CTR9Q6PD62 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTR9Q6PD62 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTR9Q6PD62 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTR9Q6PD62 AC006486.2-201ENST00000624246 2199 ntBASIC17.94■□□□□ 0.46
CTR9Q6PD62 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTR9Q6PD62 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTR9Q6PD62 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTR9Q6PD62 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTR9Q6PD62 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CTR9Q6PD62 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTR9Q6PD62 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTR9Q6PD62 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.94■□□□□ 0.46
CTR9Q6PD62 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTR9Q6PD62 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTR9Q6PD62 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTR9Q6PD62 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTR9Q6PD62 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CTR9Q6PD62 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTR9Q6PD62 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTR9Q6PD62 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTR9Q6PD62 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTR9Q6PD62 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.93■□□□□ 0.46
CTR9Q6PD62 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CTR9Q6PD62 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTR9Q6PD62 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CTR9Q6PD62 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
CTR9Q6PD62 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.93■□□□□ 0.46
CTR9Q6PD62 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTR9Q6PD62 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
CTR9Q6PD62 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.93■□□□□ 0.46
CTR9Q6PD62 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
CTR9Q6PD62 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTR9Q6PD62 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTR9Q6PD62 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTR9Q6PD62 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.93■□□□□ 0.46
CTR9Q6PD62 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTR9Q6PD62 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTR9Q6PD62 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTR9Q6PD62 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CTR9Q6PD62 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.93■□□□□ 0.46
CTR9Q6PD62 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTR9Q6PD62 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTR9Q6PD62 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTR9Q6PD62 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CTR9Q6PD62 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.93■□□□□ 0.46
CTR9Q6PD62 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
CTR9Q6PD62 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.93■□□□□ 0.46
CTR9Q6PD62 AC073413.1-201ENST00000603927 732 ntBASIC17.93■□□□□ 0.46
CTR9Q6PD62 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.93■□□□□ 0.46
CTR9Q6PD62 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTR9Q6PD62 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTR9Q6PD62 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.93■□□□□ 0.46
CTR9Q6PD62 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.93■□□□□ 0.46
CTR9Q6PD62 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.93■□□□□ 0.46
CTR9Q6PD62 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CTR9Q6PD62 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.93■□□□□ 0.46
CTR9Q6PD62 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
CTR9Q6PD62 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTR9Q6PD62 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTR9Q6PD62 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTR9Q6PD62 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTR9Q6PD62 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.92■□□□□ 0.46
CTR9Q6PD62 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.92■□□□□ 0.46
CTR9Q6PD62 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTR9Q6PD62 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTR9Q6PD62 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTR9Q6PD62 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTR9Q6PD62 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTR9Q6PD62 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTR9Q6PD62 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTR9Q6PD62 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTR9Q6PD62 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTR9Q6PD62 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
CTR9Q6PD62 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms