Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.64■□□□□ 0.41
RHBDL3P58872 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RHBDL3P58872 AC022532.1-201ENST00000624563 1728 ntBASIC17.64■□□□□ 0.41
RHBDL3P58872 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RHBDL3P58872 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDL3P58872 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.63■□□□□ 0.41
RHBDL3P58872 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDL3P58872 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDL3P58872 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.63■□□□□ 0.41
RHBDL3P58872 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDL3P58872 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDL3P58872 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RHBDL3P58872 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDL3P58872 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDL3P58872 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDL3P58872 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.63■□□□□ 0.41
RHBDL3P58872 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDL3P58872 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDL3P58872 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDL3P58872 AC092506.1-202ENST00000401022 528 ntBASIC17.63■□□□□ 0.41
RHBDL3P58872 PDIA3P2-201ENST00000428073 158 ntBASIC17.63■□□□□ 0.41
RHBDL3P58872 AC078875.1-201ENST00000431907 724 ntBASIC17.63■□□□□ 0.41
RHBDL3P58872 AC006122.1-201ENST00000493323 440 ntBASIC17.63■□□□□ 0.41
RHBDL3P58872 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.63■□□□□ 0.41
RHBDL3P58872 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.63■□□□□ 0.41
RHBDL3P58872 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RHBDL3P58872 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC17.63■□□□□ 0.41
RHBDL3P58872 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
RHBDL3P58872 AC144522.1-201ENST00000625111 1658 ntBASIC17.63■□□□□ 0.41
RHBDL3P58872 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDL3P58872 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.63■□□□□ 0.41
RHBDL3P58872 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.63■□□□□ 0.41
RHBDL3P58872 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDL3P58872 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDL3P58872 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDL3P58872 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.63■□□□□ 0.41
RHBDL3P58872 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDL3P58872 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDL3P58872 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDL3P58872 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RHBDL3P58872 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.62■□□□□ 0.41
RHBDL3P58872 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RHBDL3P58872 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.62■□□□□ 0.41
RHBDL3P58872 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDL3P58872 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDL3P58872 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.62■□□□□ 0.41
RHBDL3P58872 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDL3P58872 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDL3P58872 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDL3P58872 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDL3P58872 AC006486.2-201ENST00000624246 2199 ntBASIC17.62■□□□□ 0.41
RHBDL3P58872 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDL3P58872 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RHBDL3P58872 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDL3P58872 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RHBDL3P58872 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.62■□□□□ 0.41
RHBDL3P58872 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.62■□□□□ 0.41
RHBDL3P58872 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.62■□□□□ 0.41
RHBDL3P58872 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.62■□□□□ 0.41
RHBDL3P58872 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC17.62■□□□□ 0.41
RHBDL3P58872 AL035414.1-201ENST00000451327 857 ntBASIC17.62■□□□□ 0.41
RHBDL3P58872 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17.62■□□□□ 0.41
RHBDL3P58872 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.62■□□□□ 0.41
RHBDL3P58872 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.62■□□□□ 0.41
RHBDL3P58872 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.62■□□□□ 0.41
RHBDL3P58872 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.62■□□□□ 0.41
RHBDL3P58872 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDL3P58872 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDL3P58872 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.62■□□□□ 0.41
RHBDL3P58872 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
RHBDL3P58872 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.62■□□□□ 0.41
RHBDL3P58872 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RHBDL3P58872 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDL3P58872 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDL3P58872 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDL3P58872 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.62■□□□□ 0.41
RHBDL3P58872 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.62■□□□□ 0.41
RHBDL3P58872 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDL3P58872 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDL3P58872 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDL3P58872 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
RHBDL3P58872 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDL3P58872 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDL3P58872 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDL3P58872 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RHBDL3P58872 AL590440.2-201ENST00000641973 1595 ntBASIC17.62■□□□□ 0.41
RHBDL3P58872 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.62■□□□□ 0.41
RHBDL3P58872 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RHBDL3P58872 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RHBDL3P58872 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RHBDL3P58872 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RHBDL3P58872 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RHBDL3P58872 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RHBDL3P58872 ELK2AP-201ENST00000392510 1007 ntBASIC17.61■□□□□ 0.41
RHBDL3P58872 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.61■□□□□ 0.41
RHBDL3P58872 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.61■□□□□ 0.41
RHBDL3P58872 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC17.61■□□□□ 0.41
RHBDL3P58872 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.61■□□□□ 0.41
RHBDL3P58872 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.61■□□□□ 0.41
RHBDL3P58872 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms