Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CLDN20P56880 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN20P56880 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
CLDN20P56880 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN20P56880 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN20P56880 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.94□□□□□ -0.18
CLDN20P56880 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN20P56880 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CLDN20P56880 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.94□□□□□ -0.18
CLDN20P56880 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN20P56880 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN20P56880 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN20P56880 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CLDN20P56880 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN20P56880 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN20P56880 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN20P56880 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN20P56880 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN20P56880 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN20P56880 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN20P56880 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN20P56880 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN20P56880 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN20P56880 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN20P56880 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CLDN20P56880 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDN20P56880 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.93□□□□□ -0.18
CLDN20P56880 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN20P56880 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDN20P56880 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN20P56880 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.93□□□□□ -0.18
CLDN20P56880 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN20P56880 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.93□□□□□ -0.18
CLDN20P56880 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CLDN20P56880 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN20P56880 AL162726.2-201ENST00000438986 1017 ntBASIC13.93□□□□□ -0.18
CLDN20P56880 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.93□□□□□ -0.18
CLDN20P56880 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDN20P56880 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.93□□□□□ -0.18
CLDN20P56880 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.93□□□□□ -0.18
CLDN20P56880 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.93□□□□□ -0.18
CLDN20P56880 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.93□□□□□ -0.18
CLDN20P56880 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDN20P56880 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.93□□□□□ -0.18
CLDN20P56880 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.93□□□□□ -0.18
CLDN20P56880 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.93□□□□□ -0.18
CLDN20P56880 RPSAP52-203ENST00000622976 1023 ntBASIC13.93□□□□□ -0.18
CLDN20P56880 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.93□□□□□ -0.18
CLDN20P56880 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.93□□□□□ -0.18
CLDN20P56880 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.93□□□□□ -0.18
CLDN20P56880 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN20P56880 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
CLDN20P56880 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN20P56880 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN20P56880 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN20P56880 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN20P56880 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN20P56880 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN20P56880 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN20P56880 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDN20P56880 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN20P56880 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN20P56880 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN20P56880 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN20P56880 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CLDN20P56880 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN20P56880 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN20P56880 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CLDN20P56880 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN20P56880 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDN20P56880 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN20P56880 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CLDN20P56880 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
CLDN20P56880 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN20P56880 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CLDN20P56880 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CLDN20P56880 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDN20P56880 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN20P56880 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN20P56880 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN20P56880 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CLDN20P56880 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CLDN20P56880 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN20P56880 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN20P56880 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDN20P56880 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN20P56880 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN20P56880 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.92□□□□□ -0.18
CLDN20P56880 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDN20P56880 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN20P56880 TTTY23B-201ENST00000442790 549 ntBASIC13.92□□□□□ -0.18
CLDN20P56880 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.92□□□□□ -0.18
CLDN20P56880 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDN20P56880 GIMAP3P-201ENST00000495150 836 ntBASIC13.92□□□□□ -0.18
CLDN20P56880 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.92□□□□□ -0.18
CLDN20P56880 GAPDHP40-201ENST00000505218 1006 ntBASIC13.92□□□□□ -0.18
CLDN20P56880 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.92□□□□□ -0.18
CLDN20P56880 AC010319.3-201ENST00000597028 470 ntBASIC13.92□□□□□ -0.18
CLDN20P56880 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN20P56880 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms