Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN12P56749 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN12P56749 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN12P56749 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.22□□□□□ -0.29
CLDN12P56749 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN12P56749 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN12P56749 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN12P56749 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN12P56749 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.22□□□□□ -0.29
CLDN12P56749 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN12P56749 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN12P56749 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.22□□□□□ -0.29
CLDN12P56749 AL592309.1-201ENST00000443127 649 ntBASIC13.22□□□□□ -0.29
CLDN12P56749 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.22□□□□□ -0.29
CLDN12P56749 KRT18P3-201ENST00000451602 1288 ntBASIC13.22□□□□□ -0.29
CLDN12P56749 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.22□□□□□ -0.29
CLDN12P56749 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.22□□□□□ -0.29
CLDN12P56749 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.22□□□□□ -0.29
CLDN12P56749 SLED1-202ENST00000512051 380 ntBASIC13.22□□□□□ -0.29
CLDN12P56749 AC140113.2-201ENST00000604370 208 ntBASIC13.22□□□□□ -0.29
CLDN12P56749 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.22□□□□□ -0.29
CLDN12P56749 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN12P56749 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN12P56749 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.22□□□□□ -0.29
CLDN12P56749 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CLDN12P56749 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN12P56749 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN12P56749 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN12P56749 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN12P56749 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
CLDN12P56749 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN12P56749 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
CLDN12P56749 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN12P56749 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN12P56749 AC055811.4-201ENST00000624039 1754 ntBASIC13.22□□□□□ -0.29
CLDN12P56749 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CLDN12P56749 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.22□□□□□ -0.29
CLDN12P56749 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CLDN12P56749 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN12P56749 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLDN12P56749 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CLDN12P56749 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.22□□□□□ -0.29
CLDN12P56749 AL359881.3-201ENST00000602640 1721 ntBASIC13.22□□□□□ -0.29
CLDN12P56749 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.22□□□□□ -0.29
CLDN12P56749 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.22□□□□□ -0.29
CLDN12P56749 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CLDN12P56749 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CLDN12P56749 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN12P56749 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN12P56749 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN12P56749 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CLDN12P56749 LILRP1-201ENST00000444199 1370 ntBASIC13.21□□□□□ -0.29
CLDN12P56749 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.21□□□□□ -0.29
CLDN12P56749 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN12P56749 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.21□□□□□ -0.29
CLDN12P56749 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN12P56749 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.21□□□□□ -0.29
CLDN12P56749 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.21□□□□□ -0.29
CLDN12P56749 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CLDN12P56749 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN12P56749 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN12P56749 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN12P56749 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN12P56749 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN12P56749 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN12P56749 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN12P56749 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN12P56749 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CLDN12P56749 SPDYE17-201ENST00000412399 783 ntBASIC13.21□□□□□ -0.29
CLDN12P56749 MED15P5-201ENST00000423150 992 ntBASIC13.21□□□□□ -0.29
CLDN12P56749 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.21□□□□□ -0.29
CLDN12P56749 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.21□□□□□ -0.29
CLDN12P56749 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CLDN12P56749 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.21□□□□□ -0.29
CLDN12P56749 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.21□□□□□ -0.29
CLDN12P56749 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.21□□□□□ -0.29
CLDN12P56749 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.21□□□□□ -0.29
CLDN12P56749 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.21□□□□□ -0.29
CLDN12P56749 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.21□□□□□ -0.29
CLDN12P56749 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
CLDN12P56749 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.21□□□□□ -0.29
CLDN12P56749 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.21□□□□□ -0.29
CLDN12P56749 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.21□□□□□ -0.29
CLDN12P56749 AC084121.4-201ENST00000641598 221 ntBASIC13.21□□□□□ -0.29
CLDN12P56749 AF228730.8-201ENST00000642140 221 ntBASIC13.21□□□□□ -0.29
CLDN12P56749 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.21□□□□□ -0.29
CLDN12P56749 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN12P56749 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CLDN12P56749 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CLDN12P56749 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CLDN12P56749 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CLDN12P56749 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CLDN12P56749 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CLDN12P56749 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CLDN12P56749 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.21□□□□□ -0.3
CLDN12P56749 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CLDN12P56749 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.21□□□□□ -0.3
CLDN12P56749 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CLDN12P56749 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
CLDN12P56749 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms