Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CDH15P55291 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH15P55291 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.21□□□□□ -0.13
CDH15P55291 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH15P55291 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDH15P55291 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.21□□□□□ -0.13
CDH15P55291 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH15P55291 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH15P55291 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.21□□□□□ -0.13
CDH15P55291 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
CDH15P55291 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH15P55291 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH15P55291 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.21□□□□□ -0.13
CDH15P55291 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.21□□□□□ -0.13
CDH15P55291 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.21□□□□□ -0.13
CDH15P55291 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.21□□□□□ -0.13
CDH15P55291 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.21□□□□□ -0.13
CDH15P55291 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.21□□□□□ -0.13
CDH15P55291 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CDH15P55291 AC243562.2-201ENST00000561247 970 ntBASIC14.21□□□□□ -0.13
CDH15P55291 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH15P55291 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.21□□□□□ -0.13
CDH15P55291 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.21□□□□□ -0.13
CDH15P55291 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CDH15P55291 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.21□□□□□ -0.13
CDH15P55291 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.21□□□□□ -0.13
CDH15P55291 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.21□□□□□ -0.13
CDH15P55291 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDH15P55291 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CDH15P55291 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDH15P55291 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH15P55291 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.21□□□□□ -0.13
CDH15P55291 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
CDH15P55291 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDH15P55291 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.21□□□□□ -0.14
CDH15P55291 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CDH15P55291 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDH15P55291 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDH15P55291 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDH15P55291 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDH15P55291 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
CDH15P55291 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDH15P55291 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
CDH15P55291 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CDH15P55291 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
CDH15P55291 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH15P55291 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH15P55291 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH15P55291 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH15P55291 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CDH15P55291 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH15P55291 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.2□□□□□ -0.14
CDH15P55291 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH15P55291 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH15P55291 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH15P55291 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH15P55291 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH15P55291 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
CDH15P55291 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH15P55291 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH15P55291 AL118506.1-201ENST00000601296 3082 ntBASIC14.2□□□□□ -0.14
CDH15P55291 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH15P55291 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.2□□□□□ -0.14
CDH15P55291 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH15P55291 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH15P55291 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.2□□□□□ -0.14
CDH15P55291 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH15P55291 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH15P55291 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.2□□□□□ -0.14
CDH15P55291 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.2□□□□□ -0.14
CDH15P55291 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH15P55291 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.2□□□□□ -0.14
CDH15P55291 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.2□□□□□ -0.14
CDH15P55291 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.2□□□□□ -0.14
CDH15P55291 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.2□□□□□ -0.14
CDH15P55291 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH15P55291 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH15P55291 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH15P55291 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.2□□□□□ -0.14
CDH15P55291 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CDH15P55291 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CDH15P55291 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH15P55291 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
CDH15P55291 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
CDH15P55291 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH15P55291 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CDH15P55291 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH15P55291 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CDH15P55291 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH15P55291 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH15P55291 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CDH15P55291 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH15P55291 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
CDH15P55291 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH15P55291 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH15P55291 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CDH15P55291 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH15P55291 AC073439.1-201ENST00000624121 1774 ntBASIC14.19□□□□□ -0.14
CDH15P55291 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.19□□□□□ -0.14
CDH15P55291 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms