Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.9□□□□□ -0.02
GTF2A1P52655 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.9□□□□□ -0.02
GTF2A1P52655 AP005901.3-202ENST00000581653 237 ntBASIC14.9□□□□□ -0.02
GTF2A1P52655 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.9□□□□□ -0.02
GTF2A1P52655 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.9□□□□□ -0.02
GTF2A1P52655 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GTF2A1P52655 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.9□□□□□ -0.02
GTF2A1P52655 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GTF2A1P52655 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
GTF2A1P52655 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GTF2A1P52655 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC14.9□□□□□ -0.02
GTF2A1P52655 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.9□□□□□ -0.02
GTF2A1P52655 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.9□□□□□ -0.02
GTF2A1P52655 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GTF2A1P52655 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC14.9□□□□□ -0.02
GTF2A1P52655 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GTF2A1P52655 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.9□□□□□ -0.02
GTF2A1P52655 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
GTF2A1P52655 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC14.9□□□□□ -0.02
GTF2A1P52655 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC14.9□□□□□ -0.02
GTF2A1P52655 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
GTF2A1P52655 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC14.89□□□□□ -0.03
GTF2A1P52655 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
GTF2A1P52655 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 MAPK10-262ENST00000641051 5738 ntBASIC14.89□□□□□ -0.03
GTF2A1P52655 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.89□□□□□ -0.03
GTF2A1P52655 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 AC073335.2-201ENST00000610177 3441 ntBASIC14.89□□□□□ -0.03
GTF2A1P52655 TP73-AS1-210ENST00000637775 1455 ntBASIC14.89□□□□□ -0.03
GTF2A1P52655 AC018529.2-202ENST00000611482 3087 ntBASIC14.89□□□□□ -0.03
GTF2A1P52655 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 AC016397.2-201ENST00000624848 1985 ntBASIC14.89□□□□□ -0.03
GTF2A1P52655 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
GTF2A1P52655 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.89□□□□□ -0.03
GTF2A1P52655 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.89□□□□□ -0.03
GTF2A1P52655 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
GTF2A1P52655 LINC00638-201ENST00000555578 2518 ntBASIC14.89□□□□□ -0.03
GTF2A1P52655 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC14.89□□□□□ -0.03
GTF2A1P52655 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
GTF2A1P52655 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.89□□□□□ -0.03
GTF2A1P52655 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 AP002414.1-201ENST00000391405 1147 ntBASIC14.89□□□□□ -0.03
GTF2A1P52655 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.89□□□□□ -0.03
GTF2A1P52655 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.89□□□□□ -0.03
GTF2A1P52655 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.89□□□□□ -0.03
GTF2A1P52655 AC246785.2-201ENST00000432512 513 ntBASIC14.89□□□□□ -0.03
GTF2A1P52655 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
GTF2A1P52655 AL671277.2-201ENST00000458060 996 ntBASIC14.89□□□□□ -0.03
GTF2A1P52655 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.89□□□□□ -0.03
GTF2A1P52655 AC093827.2-201ENST00000512654 315 ntBASIC14.89□□□□□ -0.03
GTF2A1P52655 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
GTF2A1P52655 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
GTF2A1P52655 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC14.89□□□□□ -0.03
GTF2A1P52655 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
GTF2A1P52655 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 ALK-205ENST00000618119 4646 ntTSL 5 BASIC14.89□□□□□ -0.03
GTF2A1P52655 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 KRT8P49-201ENST00000604166 1432 ntBASIC14.89□□□□□ -0.03
GTF2A1P52655 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.89□□□□□ -0.03
GTF2A1P52655 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.89□□□□□ -0.03
GTF2A1P52655 PMPCAP1-201ENST00000508114 1576 ntBASIC14.89□□□□□ -0.03
GTF2A1P52655 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.89□□□□□ -0.03
GTF2A1P52655 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.89□□□□□ -0.03
GTF2A1P52655 AC027369.3-201ENST00000530465 3707 ntBASIC14.89□□□□□ -0.03
GTF2A1P52655 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC14.89□□□□□ -0.03
GTF2A1P52655 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GTF2A1P52655 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GTF2A1P52655 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GTF2A1P52655 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GTF2A1P52655 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC14.88□□□□□ -0.03
GTF2A1P52655 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC14.88□□□□□ -0.03
GTF2A1P52655 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
GTF2A1P52655 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GTF2A1P52655 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.88□□□□□ -0.03
GTF2A1P52655 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GTF2A1P52655 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms