Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.27□□□□□ -0.13
GABRA4P48169 TLE1P1-201ENST00000422965 589 ntBASIC14.27□□□□□ -0.13
GABRA4P48169 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.27□□□□□ -0.13
GABRA4P48169 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.27□□□□□ -0.13
GABRA4P48169 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.27□□□□□ -0.13
GABRA4P48169 MIR4783-201ENST00000580343 82 ntBASIC14.27□□□□□ -0.13
GABRA4P48169 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.27□□□□□ -0.13
GABRA4P48169 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.27□□□□□ -0.13
GABRA4P48169 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
GABRA4P48169 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GABRA4P48169 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.27□□□□□ -0.13
GABRA4P48169 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GABRA4P48169 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GABRA4P48169 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
GABRA4P48169 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GABRA4P48169 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GABRA4P48169 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GABRA4P48169 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.27□□□□□ -0.13
GABRA4P48169 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GABRA4P48169 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GABRA4P48169 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
GABRA4P48169 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
GABRA4P48169 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
GABRA4P48169 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GABRA4P48169 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GABRA4P48169 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
GABRA4P48169 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
GABRA4P48169 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.27□□□□□ -0.13
GABRA4P48169 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
GABRA4P48169 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
GABRA4P48169 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABRA4P48169 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABRA4P48169 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
GABRA4P48169 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABRA4P48169 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.26□□□□□ -0.13
GABRA4P48169 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.26□□□□□ -0.13
GABRA4P48169 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GABRA4P48169 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABRA4P48169 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
GABRA4P48169 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABRA4P48169 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GABRA4P48169 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
GABRA4P48169 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
GABRA4P48169 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GABRA4P48169 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.26□□□□□ -0.13
GABRA4P48169 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GABRA4P48169 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABRA4P48169 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABRA4P48169 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.26□□□□□ -0.13
GABRA4P48169 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.26□□□□□ -0.13
GABRA4P48169 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GABRA4P48169 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GABRA4P48169 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.26□□□□□ -0.13
GABRA4P48169 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.26□□□□□ -0.13
GABRA4P48169 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.26□□□□□ -0.13
GABRA4P48169 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.26□□□□□ -0.13
GABRA4P48169 AC002472.3-201ENST00000640124 621 ntBASIC14.26□□□□□ -0.13
GABRA4P48169 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.26□□□□□ -0.13
GABRA4P48169 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.26□□□□□ -0.13
GABRA4P48169 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GABRA4P48169 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABRA4P48169 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABRA4P48169 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.26□□□□□ -0.13
GABRA4P48169 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABRA4P48169 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABRA4P48169 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
GABRA4P48169 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABRA4P48169 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
GABRA4P48169 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
GABRA4P48169 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GABRA4P48169 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABRA4P48169 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABRA4P48169 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABRA4P48169 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABRA4P48169 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABRA4P48169 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABRA4P48169 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
GABRA4P48169 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABRA4P48169 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABRA4P48169 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.25□□□□□ -0.13
GABRA4P48169 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABRA4P48169 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABRA4P48169 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.25□□□□□ -0.13
GABRA4P48169 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABRA4P48169 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABRA4P48169 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABRA4P48169 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABRA4P48169 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.25□□□□□ -0.13
GABRA4P48169 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
GABRA4P48169 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABRA4P48169 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.25□□□□□ -0.13
GABRA4P48169 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.25□□□□□ -0.13
GABRA4P48169 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABRA4P48169 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABRA4P48169 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABRA4P48169 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABRA4P48169 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABRA4P48169 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
GABRA4P48169 AC006033.1-201ENST00000440505 426 ntBASIC14.25□□□□□ -0.13
GABRA4P48169 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms