Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.99□□□□□ -0.01
VARSP26640 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
VARSP26640 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARSP26640 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARSP26640 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARSP26640 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.99□□□□□ -0.01
VARSP26640 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VARSP26640 RPL5P21-201ENST00000404620 815 ntBASIC14.99□□□□□ -0.01
VARSP26640 MEP1AP4-201ENST00000423244 1087 ntBASIC14.99□□□□□ -0.01
VARSP26640 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.99□□□□□ -0.01
VARSP26640 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.99□□□□□ -0.01
VARSP26640 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
VARSP26640 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VARSP26640 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VARSP26640 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.99□□□□□ -0.01
VARSP26640 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.99□□□□□ -0.01
VARSP26640 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.99□□□□□ -0.01
VARSP26640 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.99□□□□□ -0.01
VARSP26640 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.99□□□□□ -0.01
VARSP26640 OR13I1P-201ENST00000609811 1264 ntBASIC14.99□□□□□ -0.01
VARSP26640 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.99□□□□□ -0.01
VARSP26640 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.99□□□□□ -0.01
VARSP26640 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.99□□□□□ -0.01
VARSP26640 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.99□□□□□ -0.01
VARSP26640 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARSP26640 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
VARSP26640 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARSP26640 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARSP26640 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.99□□□□□ -0.01
VARSP26640 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.99□□□□□ -0.01
VARSP26640 AC117489.1-201ENST00000625169 3217 ntBASIC14.99□□□□□ -0.01
VARSP26640 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.99□□□□□ -0.01
VARSP26640 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARSP26640 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VARSP26640 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.99□□□□□ -0.01
VARSP26640 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VARSP26640 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.99□□□□□ -0.01
VARSP26640 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARSP26640 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARSP26640 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VARSP26640 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VARSP26640 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARSP26640 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VARSP26640 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VARSP26640 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VARSP26640 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VARSP26640 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.98□□□□□ -0.01
VARSP26640 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARSP26640 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
VARSP26640 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARSP26640 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
VARSP26640 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARSP26640 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARSP26640 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARSP26640 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.98□□□□□ -0.01
VARSP26640 AJ011931.1-201ENST00000618749 2492 ntBASIC14.98□□□□□ -0.01
VARSP26640 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARSP26640 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VARSP26640 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.98□□□□□ -0.01
VARSP26640 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARSP26640 AL161772.1-201ENST00000610494 4412 ntBASIC14.98□□□□□ -0.01
VARSP26640 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARSP26640 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARSP26640 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VARSP26640 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARSP26640 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARSP26640 GNAQP1-201ENST00000444815 1067 ntBASIC14.98□□□□□ -0.01
VARSP26640 RN7SL752P-201ENST00000463779 287 ntBASIC14.98□□□□□ -0.01
VARSP26640 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.98□□□□□ -0.01
VARSP26640 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.98□□□□□ -0.01
VARSP26640 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.98□□□□□ -0.01
VARSP26640 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.98□□□□□ -0.01
VARSP26640 AC025181.2-201ENST00000606994 802 ntBASIC14.98□□□□□ -0.01
VARSP26640 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARSP26640 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.98□□□□□ -0.01
VARSP26640 MIR6799-201ENST00000620297 69 ntBASIC14.98□□□□□ -0.01
VARSP26640 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
VARSP26640 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.98□□□□□ -0.01
VARSP26640 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARSP26640 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARSP26640 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.98□□□□□ -0.01
VARSP26640 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARSP26640 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VARSP26640 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARSP26640 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARSP26640 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARSP26640 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.98□□□□□ -0.01
VARSP26640 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARSP26640 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VARSP26640 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.98□□□□□ -0.01
VARSP26640 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
VARSP26640 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.97□□□□□ -0.01
VARSP26640 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
VARSP26640 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.97□□□□□ -0.01
VARSP26640 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms