Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
PTPN3P26045 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.42■□□□□ 0.06
PTPN3P26045 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN3P26045 ACTBP8-201ENST00000403258 1108 ntBASIC15.42■□□□□ 0.06
PTPN3P26045 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN3P26045 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN3P26045 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN3P26045 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.42■□□□□ 0.06
PTPN3P26045 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.42■□□□□ 0.06
PTPN3P26045 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.42■□□□□ 0.06
PTPN3P26045 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.42■□□□□ 0.06
PTPN3P26045 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
PTPN3P26045 RPSAP52-203ENST00000622976 1023 ntBASIC15.42■□□□□ 0.06
PTPN3P26045 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.42■□□□□ 0.06
PTPN3P26045 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN3P26045 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN3P26045 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.42■□□□□ 0.06
PTPN3P26045 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
PTPN3P26045 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.42■□□□□ 0.06
PTPN3P26045 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.42■□□□□ 0.06
PTPN3P26045 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PTPN3P26045 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN3P26045 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN3P26045 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
PTPN3P26045 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN3P26045 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN3P26045 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTPN3P26045 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN3P26045 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PTPN3P26045 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN3P26045 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN3P26045 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN3P26045 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN3P26045 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PTPN3P26045 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN3P26045 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN3P26045 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN3P26045 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN3P26045 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PTPN3P26045 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN3P26045 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN3P26045 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN3P26045 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.41■□□□□ 0.06
PTPN3P26045 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN3P26045 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN3P26045 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.41■□□□□ 0.06
PTPN3P26045 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
PTPN3P26045 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN3P26045 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN3P26045 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.41■□□□□ 0.06
PTPN3P26045 GIMAP3P-201ENST00000495150 836 ntBASIC15.41■□□□□ 0.06
PTPN3P26045 AC022137.2-201ENST00000503482 481 ntBASIC15.41■□□□□ 0.06
PTPN3P26045 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.41■□□□□ 0.06
PTPN3P26045 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.41■□□□□ 0.06
PTPN3P26045 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.41■□□□□ 0.06
PTPN3P26045 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.41■□□□□ 0.06
PTPN3P26045 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.41■□□□□ 0.06
PTPN3P26045 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.41■□□□□ 0.06
PTPN3P26045 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.41■□□□□ 0.06
PTPN3P26045 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
PTPN3P26045 AC092364.2-202ENST00000597012 1073 ntBASIC15.41■□□□□ 0.06
PTPN3P26045 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.41■□□□□ 0.06
PTPN3P26045 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN3P26045 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN3P26045 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN3P26045 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN3P26045 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN3P26045 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.41■□□□□ 0.06
PTPN3P26045 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN3P26045 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN3P26045 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN3P26045 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
PTPN3P26045 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
PTPN3P26045 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN3P26045 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN3P26045 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PTPN3P26045 MSTO2P-201ENST00000314835 1709 ntBASIC15.4■□□□□ 0.06
PTPN3P26045 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
PTPN3P26045 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN3P26045 AL009178.2-201ENST00000597278 2719 ntBASIC15.4■□□□□ 0.06
PTPN3P26045 AC007191.1-201ENST00000623179 2995 ntBASIC15.4■□□□□ 0.06
PTPN3P26045 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN3P26045 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.4■□□□□ 0.06
PTPN3P26045 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN3P26045 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN3P26045 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN3P26045 INTS4P1-203ENST00000641008 3683 ntBASIC15.4■□□□□ 0.06
PTPN3P26045 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.4■□□□□ 0.06
PTPN3P26045 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN3P26045 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN3P26045 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.4■□□□□ 0.06
PTPN3P26045 LRRC59-203ENST00000576448 1531 ntBASIC15.4■□□□□ 0.06
PTPN3P26045 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PTPN3P26045 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PTPN3P26045 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PTPN3P26045 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN3P26045 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.4■□□□□ 0.06
PTPN3P26045 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN3P26045 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.4■□□□□ 0.06
PTPN3P26045 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms