Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCND1P24385 AC007326.2-201ENST00000624224 7579 ntBASIC15.33■□□□□ 0.05
CCND1P24385 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCND1P24385 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCND1P24385 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CCND1P24385 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCND1P24385 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
CCND1P24385 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CCND1P24385 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CCND1P24385 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCND1P24385 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CCND1P24385 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CCND1P24385 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCND1P24385 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCND1P24385 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCND1P24385 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.33■□□□□ 0.04
CCND1P24385 MIR943-201ENST00000401286 94 ntBASIC15.33■□□□□ 0.04
CCND1P24385 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.33■□□□□ 0.04
CCND1P24385 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.33■□□□□ 0.04
CCND1P24385 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.33■□□□□ 0.04
CCND1P24385 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
CCND1P24385 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.33■□□□□ 0.04
CCND1P24385 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCND1P24385 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCND1P24385 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.33■□□□□ 0.04
CCND1P24385 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.33■□□□□ 0.04
CCND1P24385 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.04
CCND1P24385 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.33■□□□□ 0.04
CCND1P24385 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
CCND1P24385 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.33■□□□□ 0.04
CCND1P24385 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.33■□□□□ 0.04
CCND1P24385 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.33■□□□□ 0.04
CCND1P24385 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCND1P24385 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCND1P24385 AC087499.5-201ENST00000452760 1342 ntBASIC15.33■□□□□ 0.04
CCND1P24385 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCND1P24385 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCND1P24385 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCND1P24385 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCND1P24385 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCND1P24385 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CCND1P24385 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCND1P24385 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCND1P24385 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCND1P24385 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCND1P24385 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.32■□□□□ 0.04
CCND1P24385 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCND1P24385 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCND1P24385 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
CCND1P24385 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CCND1P24385 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CCND1P24385 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCND1P24385 AC097359.2-201ENST00000604992 2389 ntBASIC15.32■□□□□ 0.04
CCND1P24385 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CCND1P24385 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCND1P24385 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.32■□□□□ 0.04
CCND1P24385 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.32■□□□□ 0.04
CCND1P24385 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.32■□□□□ 0.04
CCND1P24385 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.32■□□□□ 0.04
CCND1P24385 AC097493.3-201ENST00000509725 367 ntBASIC15.32■□□□□ 0.04
CCND1P24385 ZNF890P-202ENST00000530367 1156 ntBASIC15.32■□□□□ 0.04
CCND1P24385 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.32■□□□□ 0.04
CCND1P24385 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCND1P24385 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
CCND1P24385 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCND1P24385 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCND1P24385 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCND1P24385 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CCND1P24385 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.32■□□□□ 0.04
CCND1P24385 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.32■□□□□ 0.04
CCND1P24385 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CCND1P24385 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCND1P24385 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCND1P24385 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCND1P24385 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCND1P24385 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCND1P24385 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC15.32■□□□□ 0.04
CCND1P24385 Z97205.2-201ENST00000564697 1639 ntBASIC15.32■□□□□ 0.04
CCND1P24385 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.32■□□□□ 0.04
CCND1P24385 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.32■□□□□ 0.04
CCND1P24385 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCND1P24385 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CCND1P24385 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
CCND1P24385 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.31■□□□□ 0.04
CCND1P24385 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CCND1P24385 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CCND1P24385 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCND1P24385 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCND1P24385 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCND1P24385 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCND1P24385 AC152010.1-201ENST00000415779 2006 ntBASIC15.31■□□□□ 0.04
CCND1P24385 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.31■□□□□ 0.04
CCND1P24385 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCND1P24385 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCND1P24385 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCND1P24385 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CCND1P24385 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCND1P24385 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCND1P24385 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.31■□□□□ 0.04
CCND1P24385 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms